Gene : Brara.I02292 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  2292
Name:  ? Brara.I02292 Secondary Identifier:  ? PAC:30644594
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-922 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02292 0.5kb upstream 0.5kb upstream 3964 true A09: 17535192-17539155 Brassica rapa FPsc
Brara.I02292 0.5kb upstream 0.5kb upstream 500 false A09: 17538656-17539155 Brassica rapa FPsc
Brara.I02292 0.5kb downstream 0.5kb downstream 3964 true A09: 17534692-17538655 Brassica rapa FPsc
Brara.I02292 0.5kb downstream 0.5kb downstream 500 false A09: 17534692-17535191 Brassica rapa FPsc
Brara.I02292 1.0kb upstream 1.0kb upstream 4464 true A09: 17535192-17539655 Brassica rapa FPsc
Brara.I02292 1.0kb upstream 1.0kb upstream 1000 false A09: 17538656-17539655 Brassica rapa FPsc
Brara.I02292 1.0kb downstream 1.0kb downstream 4464 true A09: 17534192-17538655 Brassica rapa FPsc
Brara.I02292 1.0kb downstream 1.0kb downstream 1000 false A09: 17534192-17535191 Brassica rapa FPsc
Brara.I02292 2.0kb upstream 2.0kb upstream 5464 true A09: 17535192-17540655 Brassica rapa FPsc
Brara.I02292 2.0kb upstream 2.0kb upstream 2000 false A09: 17538656-17540655 Brassica rapa FPsc
Brara.I02292 2.0kb downstream 2.0kb downstream 5464 true A09: 17533192-17538655 Brassica rapa FPsc
Brara.I02292 2.0kb downstream 2.0kb downstream 2000 false A09: 17533192-17535191 Brassica rapa FPsc
Brara.I02292 5.0kb upstream 5.0kb upstream 8464 true A09: 17535192-17543655 Brassica rapa FPsc
Brara.I02292 5.0kb upstream 5.0kb upstream 5000 false A09: 17538656-17543655 Brassica rapa FPsc
Brara.I02292 5.0kb downstream 5.0kb downstream 8464 true A09: 17530192-17538655 Brassica rapa FPsc
Brara.I02292 5.0kb downstream 5.0kb downstream 5000 false A09: 17530192-17535191 Brassica rapa FPsc
Brara.I02292 10.0kb upstream 10.0kb upstream 13464 true A09: 17535192-17548655 Brassica rapa FPsc
Brara.I02292 10.0kb upstream 10.0kb upstream 10000 false A09: 17538656-17548655 Brassica rapa FPsc
Brara.I02292 10.0kb downstream 10.0kb downstream 13464 true A09: 17525192-17538655 Brassica rapa FPsc
Brara.I02292 10.0kb downstream 10.0kb downstream 10000 false A09: 17525192-17535191 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368774 5261 Brassicaceae View MSA
123839645 5264 Brassicales-Malvales View MSA
124341389 5266 SBM View MSA
124241910 5268 Malvidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier