Gene : Brara.B03064 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR21049 - RIBOPHORIN I Genomic Order:  3064
Name:  ? Brara.B03064 Secondary Identifier:  ? PAC:30610720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03064 0.5kb upstream 0.5kb upstream 6072 true A02: 25400385-25406456 Brassica rapa FPsc
Brara.B03064 0.5kb upstream 0.5kb upstream 500 false A02: 25405957-25406456 Brassica rapa FPsc
Brara.B03064 0.5kb downstream 0.5kb downstream 6072 true A02: 25399885-25405956 Brassica rapa FPsc
Brara.B03064 0.5kb downstream 0.5kb downstream 500 false A02: 25399885-25400384 Brassica rapa FPsc
Brara.B03064 1.0kb upstream 1.0kb upstream 6572 true A02: 25400385-25406956 Brassica rapa FPsc
Brara.B03064 1.0kb upstream 1.0kb upstream 1000 false A02: 25405957-25406956 Brassica rapa FPsc
Brara.B03064 1.0kb downstream 1.0kb downstream 6572 true A02: 25399385-25405956 Brassica rapa FPsc
Brara.B03064 1.0kb downstream 1.0kb downstream 1000 false A02: 25399385-25400384 Brassica rapa FPsc
Brara.B03064 2.0kb upstream 2.0kb upstream 7572 true A02: 25400385-25407956 Brassica rapa FPsc
Brara.B03064 2.0kb upstream 2.0kb upstream 2000 false A02: 25405957-25407956 Brassica rapa FPsc
Brara.B03064 2.0kb downstream 2.0kb downstream 7572 true A02: 25398385-25405956 Brassica rapa FPsc
Brara.B03064 2.0kb downstream 2.0kb downstream 2000 false A02: 25398385-25400384 Brassica rapa FPsc
Brara.B03064 5.0kb upstream 5.0kb upstream 10572 true A02: 25400385-25410956 Brassica rapa FPsc
Brara.B03064 5.0kb upstream 5.0kb upstream 5000 false A02: 25405957-25410956 Brassica rapa FPsc
Brara.B03064 5.0kb downstream 5.0kb downstream 10572 true A02: 25395385-25405956 Brassica rapa FPsc
Brara.B03064 5.0kb downstream 5.0kb downstream 5000 false A02: 25395385-25400384 Brassica rapa FPsc
Brara.B03064 10.0kb upstream 10.0kb upstream 15572 true A02: 25400385-25415956 Brassica rapa FPsc
Brara.B03064 10.0kb upstream 10.0kb upstream 10000 false A02: 25405957-25415956 Brassica rapa FPsc
Brara.B03064 10.0kb downstream 10.0kb downstream 15572 true A02: 25390385-25405956 Brassica rapa FPsc
Brara.B03064 10.0kb downstream 10.0kb downstream 10000 false A02: 25390385-25400384 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345706 5261 Brassicaceae Singleton cluster - no MSA
123839296 5264 Brassicales-Malvales View MSA
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier