Gene : Brara.I02163 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23151//PTHR23151:SF61 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  2163
Name:  ? Brara.I02163 Secondary Identifier:  ? PAC:30642932
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5173 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PYRUVDEHYD-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02163 0.5kb upstream 0.5kb upstream 2966 true A09: 16338060-16341025 Brassica rapa FPsc
Brara.I02163 0.5kb upstream 0.5kb upstream 500 false A09: 16338060-16338559 Brassica rapa FPsc
Brara.I02163 0.5kb downstream 0.5kb downstream 2966 true A09: 16338560-16341525 Brassica rapa FPsc
Brara.I02163 0.5kb downstream 0.5kb downstream 500 false A09: 16341026-16341525 Brassica rapa FPsc
Brara.I02163 1.0kb upstream 1.0kb upstream 3466 true A09: 16337560-16341025 Brassica rapa FPsc
Brara.I02163 1.0kb upstream 1.0kb upstream 1000 false A09: 16337560-16338559 Brassica rapa FPsc
Brara.I02163 1.0kb downstream 1.0kb downstream 3466 true A09: 16338560-16342025 Brassica rapa FPsc
Brara.I02163 1.0kb downstream 1.0kb downstream 1000 false A09: 16341026-16342025 Brassica rapa FPsc
Brara.I02163 2.0kb upstream 2.0kb upstream 4466 true A09: 16336560-16341025 Brassica rapa FPsc
Brara.I02163 2.0kb upstream 2.0kb upstream 2000 false A09: 16336560-16338559 Brassica rapa FPsc
Brara.I02163 2.0kb downstream 2.0kb downstream 4466 true A09: 16338560-16343025 Brassica rapa FPsc
Brara.I02163 2.0kb downstream 2.0kb downstream 2000 false A09: 16341026-16343025 Brassica rapa FPsc
Brara.I02163 5.0kb upstream 5.0kb upstream 7466 true A09: 16333560-16341025 Brassica rapa FPsc
Brara.I02163 5.0kb upstream 5.0kb upstream 5000 false A09: 16333560-16338559 Brassica rapa FPsc
Brara.I02163 5.0kb downstream 5.0kb downstream 7466 true A09: 16338560-16346025 Brassica rapa FPsc
Brara.I02163 5.0kb downstream 5.0kb downstream 5000 false A09: 16341026-16346025 Brassica rapa FPsc
Brara.I02163 10.0kb upstream 10.0kb upstream 12466 true A09: 16328560-16341025 Brassica rapa FPsc
Brara.I02163 10.0kb upstream 10.0kb upstream 10000 false A09: 16328560-16338559 Brassica rapa FPsc
Brara.I02163 10.0kb downstream 10.0kb downstream 12466 true A09: 16338560-16351025 Brassica rapa FPsc
Brara.I02163 10.0kb downstream 10.0kb downstream 10000 false A09: 16341026-16351025 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368345 5261 Brassicaceae View MSA
123834524 5264 Brassicales-Malvales View MSA
124341076 5266 SBM View MSA
124252180 5268 Malvidae View MSA
124064326 5270 Rosid View MSA
123740980 5271 Pentapetalae View MSA
122792137 5272 Eudicot View MSA
122047464 5273 Angiosperm View MSA
121347035 5274 Embryophyte View MSA
123424416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier