Gene : Brara.I02180 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00036//PF00070 - EF hand (EF-hand_1) // Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox) Genomic Order:  2180
Name:  ? Brara.I02180 Secondary Identifier:  ? PAC:30645096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02180 0.5kb upstream 0.5kb upstream 4411 true A09: 16490266-16494676 Brassica rapa FPsc
Brara.I02180 0.5kb upstream 0.5kb upstream 500 false A09: 16494177-16494676 Brassica rapa FPsc
Brara.I02180 0.5kb downstream 0.5kb downstream 4411 true A09: 16489766-16494176 Brassica rapa FPsc
Brara.I02180 0.5kb downstream 0.5kb downstream 500 false A09: 16489766-16490265 Brassica rapa FPsc
Brara.I02180 1.0kb upstream 1.0kb upstream 4911 true A09: 16490266-16495176 Brassica rapa FPsc
Brara.I02180 1.0kb upstream 1.0kb upstream 1000 false A09: 16494177-16495176 Brassica rapa FPsc
Brara.I02180 1.0kb downstream 1.0kb downstream 4911 true A09: 16489266-16494176 Brassica rapa FPsc
Brara.I02180 1.0kb downstream 1.0kb downstream 1000 false A09: 16489266-16490265 Brassica rapa FPsc
Brara.I02180 2.0kb upstream 2.0kb upstream 5911 true A09: 16490266-16496176 Brassica rapa FPsc
Brara.I02180 2.0kb upstream 2.0kb upstream 2000 false A09: 16494177-16496176 Brassica rapa FPsc
Brara.I02180 2.0kb downstream 2.0kb downstream 5911 true A09: 16488266-16494176 Brassica rapa FPsc
Brara.I02180 2.0kb downstream 2.0kb downstream 2000 false A09: 16488266-16490265 Brassica rapa FPsc
Brara.I02180 5.0kb upstream 5.0kb upstream 8911 true A09: 16490266-16499176 Brassica rapa FPsc
Brara.I02180 5.0kb upstream 5.0kb upstream 5000 false A09: 16494177-16499176 Brassica rapa FPsc
Brara.I02180 5.0kb downstream 5.0kb downstream 8911 true A09: 16485266-16494176 Brassica rapa FPsc
Brara.I02180 5.0kb downstream 5.0kb downstream 5000 false A09: 16485266-16490265 Brassica rapa FPsc
Brara.I02180 10.0kb upstream 10.0kb upstream 13911 true A09: 16490266-16504176 Brassica rapa FPsc
Brara.I02180 10.0kb upstream 10.0kb upstream 10000 false A09: 16494177-16504176 Brassica rapa FPsc
Brara.I02180 10.0kb downstream 10.0kb downstream 13911 true A09: 16480266-16494176 Brassica rapa FPsc
Brara.I02180 10.0kb downstream 10.0kb downstream 10000 false A09: 16480266-16490265 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377484 5261 Brassicaceae View MSA
123827857 5264 Brassicales-Malvales View MSA
124343190 5266 SBM View MSA
124243492 5268 Malvidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier