Gene : Brara.B03115 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.7.7.60 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / MEP cytidylyltransferase Genomic Order:  3115
Name:  ? Brara.B03115 Secondary Identifier:  ? PAC:30607928
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7560 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03115 0.5kb upstream 0.5kb upstream 2777 true A02: 26009100-26011876 Brassica rapa FPsc
Brara.B03115 0.5kb upstream 0.5kb upstream 500 false A02: 26011377-26011876 Brassica rapa FPsc
Brara.B03115 0.5kb downstream 0.5kb downstream 2777 true A02: 26008600-26011376 Brassica rapa FPsc
Brara.B03115 0.5kb downstream 0.5kb downstream 500 false A02: 26008600-26009099 Brassica rapa FPsc
Brara.B03115 1.0kb upstream 1.0kb upstream 3277 true A02: 26009100-26012376 Brassica rapa FPsc
Brara.B03115 1.0kb upstream 1.0kb upstream 1000 false A02: 26011377-26012376 Brassica rapa FPsc
Brara.B03115 1.0kb downstream 1.0kb downstream 3277 true A02: 26008100-26011376 Brassica rapa FPsc
Brara.B03115 1.0kb downstream 1.0kb downstream 1000 false A02: 26008100-26009099 Brassica rapa FPsc
Brara.B03115 2.0kb upstream 2.0kb upstream 4277 true A02: 26009100-26013376 Brassica rapa FPsc
Brara.B03115 2.0kb upstream 2.0kb upstream 2000 false A02: 26011377-26013376 Brassica rapa FPsc
Brara.B03115 2.0kb downstream 2.0kb downstream 4277 true A02: 26007100-26011376 Brassica rapa FPsc
Brara.B03115 2.0kb downstream 2.0kb downstream 2000 false A02: 26007100-26009099 Brassica rapa FPsc
Brara.B03115 5.0kb upstream 5.0kb upstream 7277 true A02: 26009100-26016376 Brassica rapa FPsc
Brara.B03115 5.0kb upstream 5.0kb upstream 5000 false A02: 26011377-26016376 Brassica rapa FPsc
Brara.B03115 5.0kb downstream 5.0kb downstream 7277 true A02: 26004100-26011376 Brassica rapa FPsc
Brara.B03115 5.0kb downstream 5.0kb downstream 5000 false A02: 26004100-26009099 Brassica rapa FPsc
Brara.B03115 10.0kb upstream 10.0kb upstream 12277 true A02: 26009100-26021376 Brassica rapa FPsc
Brara.B03115 10.0kb upstream 10.0kb upstream 10000 false A02: 26011377-26021376 Brassica rapa FPsc
Brara.B03115 10.0kb downstream 10.0kb downstream 12277 true A02: 25999100-26011376 Brassica rapa FPsc
Brara.B03115 10.0kb downstream 10.0kb downstream 10000 false A02: 25999100-26009099 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361026 5261 Brassicaceae View MSA
123834534 5264 Brassicales-Malvales View MSA
124338022 5266 SBM View MSA
124240057 5268 Malvidae View MSA
124060576 5270 Rosid View MSA
123739794 5271 Pentapetalae View MSA
122786593 5272 Eudicot View MSA
122044265 5273 Angiosperm View MSA
121344499 5274 Embryophyte View MSA
123424809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier