Gene : Brara.E01079 B. rapa FPsc v1.3
Defline:  (1 of 5) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  1079
Name:  ? Brara.E01079 Secondary Identifier:  ? PAC:30627364
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6435 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01079 0.5kb upstream 0.5kb upstream 3714 true A05: 6390179-6393892 Brassica rapa FPsc
Brara.E01079 0.5kb upstream 0.5kb upstream 500 false A05: 6390179-6390678 Brassica rapa FPsc
Brara.E01079 0.5kb downstream 0.5kb downstream 3714 true A05: 6390679-6394392 Brassica rapa FPsc
Brara.E01079 0.5kb downstream 0.5kb downstream 500 false A05: 6393893-6394392 Brassica rapa FPsc
Brara.E01079 1.0kb upstream 1.0kb upstream 4214 true A05: 6389679-6393892 Brassica rapa FPsc
Brara.E01079 1.0kb upstream 1.0kb upstream 1000 false A05: 6389679-6390678 Brassica rapa FPsc
Brara.E01079 1.0kb downstream 1.0kb downstream 4214 true A05: 6390679-6394892 Brassica rapa FPsc
Brara.E01079 1.0kb downstream 1.0kb downstream 1000 false A05: 6393893-6394892 Brassica rapa FPsc
Brara.E01079 2.0kb upstream 2.0kb upstream 5214 true A05: 6388679-6393892 Brassica rapa FPsc
Brara.E01079 2.0kb upstream 2.0kb upstream 2000 false A05: 6388679-6390678 Brassica rapa FPsc
Brara.E01079 2.0kb downstream 2.0kb downstream 5214 true A05: 6390679-6395892 Brassica rapa FPsc
Brara.E01079 2.0kb downstream 2.0kb downstream 2000 false A05: 6393893-6395892 Brassica rapa FPsc
Brara.E01079 5.0kb upstream 5.0kb upstream 8214 true A05: 6385679-6393892 Brassica rapa FPsc
Brara.E01079 5.0kb upstream 5.0kb upstream 5000 false A05: 6385679-6390678 Brassica rapa FPsc
Brara.E01079 5.0kb downstream 5.0kb downstream 8214 true A05: 6390679-6398892 Brassica rapa FPsc
Brara.E01079 5.0kb downstream 5.0kb downstream 5000 false A05: 6393893-6398892 Brassica rapa FPsc
Brara.E01079 10.0kb upstream 10.0kb upstream 13214 true A05: 6380679-6393892 Brassica rapa FPsc
Brara.E01079 10.0kb upstream 10.0kb upstream 10000 false A05: 6380679-6390678 Brassica rapa FPsc
Brara.E01079 10.0kb downstream 10.0kb downstream 13214 true A05: 6390679-6403892 Brassica rapa FPsc
Brara.E01079 10.0kb downstream 10.0kb downstream 10000 false A05: 6393893-6403892 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376255 5261 Brassicaceae View MSA
123828476 5264 Brassicales-Malvales View MSA
124344876 5266 SBM View MSA
124242182 5268 Malvidae View MSA
124065110 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier