Gene : Brara.I02130 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  2130
Name:  ? Brara.I02130 Secondary Identifier:  ? PAC:30642223
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02130 0.5kb upstream 0.5kb upstream 2484 true A09: 16041374-16043857 Brassica rapa FPsc
Brara.I02130 0.5kb upstream 0.5kb upstream 500 false A09: 16043358-16043857 Brassica rapa FPsc
Brara.I02130 0.5kb downstream 0.5kb downstream 2484 true A09: 16040874-16043357 Brassica rapa FPsc
Brara.I02130 0.5kb downstream 0.5kb downstream 500 false A09: 16040874-16041373 Brassica rapa FPsc
Brara.I02130 1.0kb upstream 1.0kb upstream 2984 true A09: 16041374-16044357 Brassica rapa FPsc
Brara.I02130 1.0kb upstream 1.0kb upstream 1000 false A09: 16043358-16044357 Brassica rapa FPsc
Brara.I02130 1.0kb downstream 1.0kb downstream 2984 true A09: 16040374-16043357 Brassica rapa FPsc
Brara.I02130 1.0kb downstream 1.0kb downstream 1000 false A09: 16040374-16041373 Brassica rapa FPsc
Brara.I02130 2.0kb upstream 2.0kb upstream 3984 true A09: 16041374-16045357 Brassica rapa FPsc
Brara.I02130 2.0kb upstream 2.0kb upstream 2000 false A09: 16043358-16045357 Brassica rapa FPsc
Brara.I02130 2.0kb downstream 2.0kb downstream 3984 true A09: 16039374-16043357 Brassica rapa FPsc
Brara.I02130 2.0kb downstream 2.0kb downstream 2000 false A09: 16039374-16041373 Brassica rapa FPsc
Brara.I02130 5.0kb upstream 5.0kb upstream 6984 true A09: 16041374-16048357 Brassica rapa FPsc
Brara.I02130 5.0kb upstream 5.0kb upstream 5000 false A09: 16043358-16048357 Brassica rapa FPsc
Brara.I02130 5.0kb downstream 5.0kb downstream 6984 true A09: 16036374-16043357 Brassica rapa FPsc
Brara.I02130 5.0kb downstream 5.0kb downstream 5000 false A09: 16036374-16041373 Brassica rapa FPsc
Brara.I02130 10.0kb upstream 10.0kb upstream 11984 true A09: 16041374-16053357 Brassica rapa FPsc
Brara.I02130 10.0kb upstream 10.0kb upstream 10000 false A09: 16043358-16053357 Brassica rapa FPsc
Brara.I02130 10.0kb downstream 10.0kb downstream 11984 true A09: 16031374-16043357 Brassica rapa FPsc
Brara.I02130 10.0kb downstream 10.0kb downstream 10000 false A09: 16031374-16041373 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337411 5266 SBM View MSA
122378826 5261 Brassicaceae View MSA
123837439 5264 Brassicales-Malvales View MSA
124248953 5268 Malvidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier