Gene : Brara.I02138 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.3.1.191 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase / UDP-3-O-acyl-glucosamine N-acyltransferase Genomic Order:  2138
Name:  ? Brara.I02138 Secondary Identifier:  ? PAC:30642463
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc NAGLIPASYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02138 0.5kb upstream 0.5kb upstream 2611 true A09: 16086497-16089107 Brassica rapa FPsc
Brara.I02138 0.5kb upstream 0.5kb upstream 500 false A09: 16088608-16089107 Brassica rapa FPsc
Brara.I02138 0.5kb downstream 0.5kb downstream 2611 true A09: 16085997-16088607 Brassica rapa FPsc
Brara.I02138 0.5kb downstream 0.5kb downstream 500 false A09: 16085997-16086496 Brassica rapa FPsc
Brara.I02138 1.0kb upstream 1.0kb upstream 3111 true A09: 16086497-16089607 Brassica rapa FPsc
Brara.I02138 1.0kb upstream 1.0kb upstream 1000 false A09: 16088608-16089607 Brassica rapa FPsc
Brara.I02138 1.0kb downstream 1.0kb downstream 3111 true A09: 16085497-16088607 Brassica rapa FPsc
Brara.I02138 1.0kb downstream 1.0kb downstream 1000 false A09: 16085497-16086496 Brassica rapa FPsc
Brara.I02138 2.0kb upstream 2.0kb upstream 4111 true A09: 16086497-16090607 Brassica rapa FPsc
Brara.I02138 2.0kb upstream 2.0kb upstream 2000 false A09: 16088608-16090607 Brassica rapa FPsc
Brara.I02138 2.0kb downstream 2.0kb downstream 4111 true A09: 16084497-16088607 Brassica rapa FPsc
Brara.I02138 2.0kb downstream 2.0kb downstream 2000 false A09: 16084497-16086496 Brassica rapa FPsc
Brara.I02138 5.0kb upstream 5.0kb upstream 7111 true A09: 16086497-16093607 Brassica rapa FPsc
Brara.I02138 5.0kb upstream 5.0kb upstream 5000 false A09: 16088608-16093607 Brassica rapa FPsc
Brara.I02138 5.0kb downstream 5.0kb downstream 7111 true A09: 16081497-16088607 Brassica rapa FPsc
Brara.I02138 5.0kb downstream 5.0kb downstream 5000 false A09: 16081497-16086496 Brassica rapa FPsc
Brara.I02138 10.0kb upstream 10.0kb upstream 12111 true A09: 16086497-16098607 Brassica rapa FPsc
Brara.I02138 10.0kb upstream 10.0kb upstream 10000 false A09: 16088608-16098607 Brassica rapa FPsc
Brara.I02138 10.0kb downstream 10.0kb downstream 12111 true A09: 16076497-16088607 Brassica rapa FPsc
Brara.I02138 10.0kb downstream 10.0kb downstream 10000 false A09: 16076497-16086496 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375764 5261 Brassicaceae View MSA
123829957 5264 Brassicales-Malvales View MSA
124341788 5266 SBM View MSA
124240703 5268 Malvidae View MSA
124065572 5270 Rosid View MSA
123744940 5271 Pentapetalae View MSA
122787532 5272 Eudicot View MSA
122047698 5273 Angiosperm View MSA
121346059 5274 Embryophyte View MSA
123380314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier