Gene : Brara.I02141 B. rapa FPsc v1.3

Defline:  (1 of 2) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  2141
Name:  ? Brara.I02141 Secondary Identifier:  ? PAC:30642074

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02141 0.5kb upstream 0.5kb upstream 2088 true A09: 16099569-16101656 Brassica rapa FPsc
Brara.I02141 0.5kb upstream 0.5kb upstream 500 false A09: 16099569-16100068 Brassica rapa FPsc
Brara.I02141 0.5kb downstream 0.5kb downstream 2088 true A09: 16100069-16102156 Brassica rapa FPsc
Brara.I02141 0.5kb downstream 0.5kb downstream 500 false A09: 16101657-16102156 Brassica rapa FPsc
Brara.I02141 1.0kb upstream 1.0kb upstream 2588 true A09: 16099069-16101656 Brassica rapa FPsc
Brara.I02141 1.0kb upstream 1.0kb upstream 1000 false A09: 16099069-16100068 Brassica rapa FPsc
Brara.I02141 1.0kb downstream 1.0kb downstream 2588 true A09: 16100069-16102656 Brassica rapa FPsc
Brara.I02141 1.0kb downstream 1.0kb downstream 1000 false A09: 16101657-16102656 Brassica rapa FPsc
Brara.I02141 2.0kb upstream 2.0kb upstream 3588 true A09: 16098069-16101656 Brassica rapa FPsc
Brara.I02141 2.0kb upstream 2.0kb upstream 2000 false A09: 16098069-16100068 Brassica rapa FPsc
Brara.I02141 2.0kb downstream 2.0kb downstream 3588 true A09: 16100069-16103656 Brassica rapa FPsc
Brara.I02141 2.0kb downstream 2.0kb downstream 2000 false A09: 16101657-16103656 Brassica rapa FPsc
Brara.I02141 5.0kb upstream 5.0kb upstream 6588 true A09: 16095069-16101656 Brassica rapa FPsc
Brara.I02141 5.0kb upstream 5.0kb upstream 5000 false A09: 16095069-16100068 Brassica rapa FPsc
Brara.I02141 5.0kb downstream 5.0kb downstream 6588 true A09: 16100069-16106656 Brassica rapa FPsc
Brara.I02141 5.0kb downstream 5.0kb downstream 5000 false A09: 16101657-16106656 Brassica rapa FPsc
Brara.I02141 10.0kb upstream 10.0kb upstream 11588 true A09: 16090069-16101656 Brassica rapa FPsc
Brara.I02141 10.0kb upstream 10.0kb upstream 10000 false A09: 16090069-16100068 Brassica rapa FPsc
Brara.I02141 10.0kb downstream 10.0kb downstream 11588 true A09: 16100069-16111656 Brassica rapa FPsc
Brara.I02141 10.0kb downstream 10.0kb downstream 10000 false A09: 16101657-16111656 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363220 5261 Brassicaceae View MSA
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier