Gene : Brara.I01994 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23130:SF80 - AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 Genomic Order:  1994
Name:  ? Brara.I01994 Secondary Identifier:  ? PAC:30643271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01994 0.5kb upstream 0.5kb upstream 1763 true A09: 14794209-14795971 Brassica rapa FPsc
Brara.I01994 0.5kb upstream 0.5kb upstream 500 false A09: 14794209-14794708 Brassica rapa FPsc
Brara.I01994 0.5kb downstream 0.5kb downstream 1763 true A09: 14794709-14796471 Brassica rapa FPsc
Brara.I01994 0.5kb downstream 0.5kb downstream 500 false A09: 14795972-14796471 Brassica rapa FPsc
Brara.I01994 1.0kb upstream 1.0kb upstream 2263 true A09: 14793709-14795971 Brassica rapa FPsc
Brara.I01994 1.0kb upstream 1.0kb upstream 1000 false A09: 14793709-14794708 Brassica rapa FPsc
Brara.I01994 1.0kb downstream 1.0kb downstream 2263 true A09: 14794709-14796971 Brassica rapa FPsc
Brara.I01994 1.0kb downstream 1.0kb downstream 1000 false A09: 14795972-14796971 Brassica rapa FPsc
Brara.I01994 2.0kb upstream 2.0kb upstream 3263 true A09: 14792709-14795971 Brassica rapa FPsc
Brara.I01994 2.0kb upstream 2.0kb upstream 2000 false A09: 14792709-14794708 Brassica rapa FPsc
Brara.I01994 2.0kb downstream 2.0kb downstream 3263 true A09: 14794709-14797971 Brassica rapa FPsc
Brara.I01994 2.0kb downstream 2.0kb downstream 2000 false A09: 14795972-14797971 Brassica rapa FPsc
Brara.I01994 5.0kb upstream 5.0kb upstream 6263 true A09: 14789709-14795971 Brassica rapa FPsc
Brara.I01994 5.0kb upstream 5.0kb upstream 5000 false A09: 14789709-14794708 Brassica rapa FPsc
Brara.I01994 5.0kb downstream 5.0kb downstream 6263 true A09: 14794709-14800971 Brassica rapa FPsc
Brara.I01994 5.0kb downstream 5.0kb downstream 5000 false A09: 14795972-14800971 Brassica rapa FPsc
Brara.I01994 10.0kb upstream 10.0kb upstream 11263 true A09: 14784709-14795971 Brassica rapa FPsc
Brara.I01994 10.0kb upstream 10.0kb upstream 10000 false A09: 14784709-14794708 Brassica rapa FPsc
Brara.I01994 10.0kb downstream 10.0kb downstream 11263 true A09: 14794709-14805971 Brassica rapa FPsc
Brara.I01994 10.0kb downstream 10.0kb downstream 10000 false A09: 14795972-14805971 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353863 5261 Brassicaceae Singleton cluster - no MSA
123792355 5264 Brassicales-Malvales Singleton cluster - no MSA
124350286 5266 SBM View MSA
124249601 5268 Malvidae View MSA
124069237 5270 Rosid View MSA
123742900 5271 Pentapetalae View MSA
122770434 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier