Gene : Brara.I01860 B. rapa FPsc v1.3
Defline:  (1 of 6) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  1860
Name:  ? Brara.I01860 Secondary Identifier:  ? PAC:30642868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01860 0.5kb upstream 0.5kb upstream 5351 true A09: 13105604-13110954 Brassica rapa FPsc
Brara.I01860 0.5kb upstream 0.5kb upstream 500 false A09: 13110455-13110954 Brassica rapa FPsc
Brara.I01860 0.5kb downstream 0.5kb downstream 5351 true A09: 13105104-13110454 Brassica rapa FPsc
Brara.I01860 0.5kb downstream 0.5kb downstream 500 false A09: 13105104-13105603 Brassica rapa FPsc
Brara.I01860 1.0kb upstream 1.0kb upstream 5851 true A09: 13105604-13111454 Brassica rapa FPsc
Brara.I01860 1.0kb upstream 1.0kb upstream 1000 false A09: 13110455-13111454 Brassica rapa FPsc
Brara.I01860 1.0kb downstream 1.0kb downstream 5851 true A09: 13104604-13110454 Brassica rapa FPsc
Brara.I01860 1.0kb downstream 1.0kb downstream 1000 false A09: 13104604-13105603 Brassica rapa FPsc
Brara.I01860 2.0kb upstream 2.0kb upstream 6851 true A09: 13105604-13112454 Brassica rapa FPsc
Brara.I01860 2.0kb upstream 2.0kb upstream 2000 false A09: 13110455-13112454 Brassica rapa FPsc
Brara.I01860 2.0kb downstream 2.0kb downstream 6851 true A09: 13103604-13110454 Brassica rapa FPsc
Brara.I01860 2.0kb downstream 2.0kb downstream 2000 false A09: 13103604-13105603 Brassica rapa FPsc
Brara.I01860 5.0kb upstream 5.0kb upstream 9851 true A09: 13105604-13115454 Brassica rapa FPsc
Brara.I01860 5.0kb upstream 5.0kb upstream 5000 false A09: 13110455-13115454 Brassica rapa FPsc
Brara.I01860 5.0kb downstream 5.0kb downstream 9851 true A09: 13100604-13110454 Brassica rapa FPsc
Brara.I01860 5.0kb downstream 5.0kb downstream 5000 false A09: 13100604-13105603 Brassica rapa FPsc
Brara.I01860 10.0kb upstream 10.0kb upstream 14851 true A09: 13105604-13120454 Brassica rapa FPsc
Brara.I01860 10.0kb upstream 10.0kb upstream 10000 false A09: 13110455-13120454 Brassica rapa FPsc
Brara.I01860 10.0kb downstream 10.0kb downstream 14851 true A09: 13095604-13110454 Brassica rapa FPsc
Brara.I01860 10.0kb downstream 10.0kb downstream 10000 false A09: 13095604-13105603 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121506920 5273 Angiosperm Singleton cluster - no MSA
122353779 5261 Brassicaceae Singleton cluster - no MSA
123792291 5264 Brassicales-Malvales Singleton cluster - no MSA
124290170 5266 SBM Singleton cluster - no MSA
124143362 5268 Malvidae Singleton cluster - no MSA
123870090 5270 Rosid Singleton cluster - no MSA
123454552 5271 Pentapetalae Singleton cluster - no MSA
122489998 5272 Eudicot Singleton cluster - no MSA
120780096 5274 Embryophyte Singleton cluster - no MSA
123426796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier