Gene : Brara.I01800 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.13.11.54 - Acireductone dioxygenase (Fe(2+)-requiring) / E-2' Genomic Order:  1800
Name:  ? Brara.I01800 Secondary Identifier:  ? PAC:30646349
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4361 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7528 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01800 0.5kb upstream 0.5kb upstream 2522 true A09: 12563270-12565791 Brassica rapa FPsc
Brara.I01800 0.5kb upstream 0.5kb upstream 500 false A09: 12565292-12565791 Brassica rapa FPsc
Brara.I01800 0.5kb downstream 0.5kb downstream 2522 true A09: 12562770-12565291 Brassica rapa FPsc
Brara.I01800 0.5kb downstream 0.5kb downstream 500 false A09: 12562770-12563269 Brassica rapa FPsc
Brara.I01800 1.0kb upstream 1.0kb upstream 3022 true A09: 12563270-12566291 Brassica rapa FPsc
Brara.I01800 1.0kb upstream 1.0kb upstream 1000 false A09: 12565292-12566291 Brassica rapa FPsc
Brara.I01800 1.0kb downstream 1.0kb downstream 3022 true A09: 12562270-12565291 Brassica rapa FPsc
Brara.I01800 1.0kb downstream 1.0kb downstream 1000 false A09: 12562270-12563269 Brassica rapa FPsc
Brara.I01800 2.0kb upstream 2.0kb upstream 4022 true A09: 12563270-12567291 Brassica rapa FPsc
Brara.I01800 2.0kb upstream 2.0kb upstream 2000 false A09: 12565292-12567291 Brassica rapa FPsc
Brara.I01800 2.0kb downstream 2.0kb downstream 4022 true A09: 12561270-12565291 Brassica rapa FPsc
Brara.I01800 2.0kb downstream 2.0kb downstream 2000 false A09: 12561270-12563269 Brassica rapa FPsc
Brara.I01800 5.0kb upstream 5.0kb upstream 7022 true A09: 12563270-12570291 Brassica rapa FPsc
Brara.I01800 5.0kb upstream 5.0kb upstream 5000 false A09: 12565292-12570291 Brassica rapa FPsc
Brara.I01800 5.0kb downstream 5.0kb downstream 7022 true A09: 12558270-12565291 Brassica rapa FPsc
Brara.I01800 5.0kb downstream 5.0kb downstream 5000 false A09: 12558270-12563269 Brassica rapa FPsc
Brara.I01800 10.0kb upstream 10.0kb upstream 12022 true A09: 12563270-12575291 Brassica rapa FPsc
Brara.I01800 10.0kb upstream 10.0kb upstream 10000 false A09: 12565292-12575291 Brassica rapa FPsc
Brara.I01800 10.0kb downstream 10.0kb downstream 12022 true A09: 12553270-12565291 Brassica rapa FPsc
Brara.I01800 10.0kb downstream 10.0kb downstream 10000 false A09: 12553270-12563269 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370454 5261 Brassicaceae View MSA
123834672 5264 Brassicales-Malvales View MSA
124342820 5266 SBM View MSA
124240096 5268 Malvidae View MSA
124070684 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier