Gene : Brara.E01498 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR16517//PTHR16517:SF35 - TUBBY-RELATED Genomic Order:  1498
Name:  ? Brara.E01498 Secondary Identifier:  ? PAC:30626813
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01498 0.5kb upstream 0.5kb upstream 2884 true A05: 9753190-9756073 Brassica rapa FPsc
Brara.E01498 0.5kb upstream 0.5kb upstream 500 false A05: 9753190-9753689 Brassica rapa FPsc
Brara.E01498 0.5kb downstream 0.5kb downstream 2884 true A05: 9753690-9756573 Brassica rapa FPsc
Brara.E01498 0.5kb downstream 0.5kb downstream 500 false A05: 9756074-9756573 Brassica rapa FPsc
Brara.E01498 1.0kb upstream 1.0kb upstream 3384 true A05: 9752690-9756073 Brassica rapa FPsc
Brara.E01498 1.0kb upstream 1.0kb upstream 1000 false A05: 9752690-9753689 Brassica rapa FPsc
Brara.E01498 1.0kb downstream 1.0kb downstream 3384 true A05: 9753690-9757073 Brassica rapa FPsc
Brara.E01498 1.0kb downstream 1.0kb downstream 1000 false A05: 9756074-9757073 Brassica rapa FPsc
Brara.E01498 2.0kb upstream 2.0kb upstream 4384 true A05: 9751690-9756073 Brassica rapa FPsc
Brara.E01498 2.0kb upstream 2.0kb upstream 2000 false A05: 9751690-9753689 Brassica rapa FPsc
Brara.E01498 2.0kb downstream 2.0kb downstream 4384 true A05: 9753690-9758073 Brassica rapa FPsc
Brara.E01498 2.0kb downstream 2.0kb downstream 2000 false A05: 9756074-9758073 Brassica rapa FPsc
Brara.E01498 5.0kb upstream 5.0kb upstream 7384 true A05: 9748690-9756073 Brassica rapa FPsc
Brara.E01498 5.0kb upstream 5.0kb upstream 5000 false A05: 9748690-9753689 Brassica rapa FPsc
Brara.E01498 5.0kb downstream 5.0kb downstream 7384 true A05: 9753690-9761073 Brassica rapa FPsc
Brara.E01498 5.0kb downstream 5.0kb downstream 5000 false A05: 9756074-9761073 Brassica rapa FPsc
Brara.E01498 10.0kb upstream 10.0kb upstream 12384 true A05: 9743690-9756073 Brassica rapa FPsc
Brara.E01498 10.0kb upstream 10.0kb upstream 10000 false A05: 9743690-9753689 Brassica rapa FPsc
Brara.E01498 10.0kb downstream 10.0kb downstream 12384 true A05: 9753690-9766073 Brassica rapa FPsc
Brara.E01498 10.0kb downstream 10.0kb downstream 10000 false A05: 9756074-9766073 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349875 5261 Brassicaceae Singleton cluster - no MSA
123788994 5264 Brassicales-Malvales Singleton cluster - no MSA
124287007 5266 SBM Singleton cluster - no MSA
124253064 5268 Malvidae View MSA
124061146 5270 Rosid View MSA
123740168 5271 Pentapetalae View MSA
122785762 5272 Eudicot View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier