Gene : Brara.I03513 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  3513
Name:  ? Brara.I03513 Secondary Identifier:  ? PAC:30640894
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03513 0.5kb upstream 0.5kb upstream 3673 true A09: 33051465-33055137 Brassica rapa FPsc
Brara.I03513 0.5kb upstream 0.5kb upstream 500 false A09: 33054638-33055137 Brassica rapa FPsc
Brara.I03513 0.5kb downstream 0.5kb downstream 3673 true A09: 33050965-33054637 Brassica rapa FPsc
Brara.I03513 0.5kb downstream 0.5kb downstream 500 false A09: 33050965-33051464 Brassica rapa FPsc
Brara.I03513 1.0kb upstream 1.0kb upstream 4173 true A09: 33051465-33055637 Brassica rapa FPsc
Brara.I03513 1.0kb upstream 1.0kb upstream 1000 false A09: 33054638-33055637 Brassica rapa FPsc
Brara.I03513 1.0kb downstream 1.0kb downstream 4173 true A09: 33050465-33054637 Brassica rapa FPsc
Brara.I03513 1.0kb downstream 1.0kb downstream 1000 false A09: 33050465-33051464 Brassica rapa FPsc
Brara.I03513 2.0kb upstream 2.0kb upstream 5173 true A09: 33051465-33056637 Brassica rapa FPsc
Brara.I03513 2.0kb upstream 2.0kb upstream 2000 false A09: 33054638-33056637 Brassica rapa FPsc
Brara.I03513 2.0kb downstream 2.0kb downstream 5173 true A09: 33049465-33054637 Brassica rapa FPsc
Brara.I03513 2.0kb downstream 2.0kb downstream 2000 false A09: 33049465-33051464 Brassica rapa FPsc
Brara.I03513 5.0kb upstream 5.0kb upstream 8173 true A09: 33051465-33059637 Brassica rapa FPsc
Brara.I03513 5.0kb upstream 5.0kb upstream 5000 false A09: 33054638-33059637 Brassica rapa FPsc
Brara.I03513 5.0kb downstream 5.0kb downstream 8173 true A09: 33046465-33054637 Brassica rapa FPsc
Brara.I03513 5.0kb downstream 5.0kb downstream 5000 false A09: 33046465-33051464 Brassica rapa FPsc
Brara.I03513 10.0kb upstream 10.0kb upstream 13173 true A09: 33051465-33064637 Brassica rapa FPsc
Brara.I03513 10.0kb upstream 10.0kb upstream 10000 false A09: 33054638-33064637 Brassica rapa FPsc
Brara.I03513 10.0kb downstream 10.0kb downstream 13173 true A09: 33041465-33054637 Brassica rapa FPsc
Brara.I03513 10.0kb downstream 10.0kb downstream 10000 false A09: 33041465-33051464 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373643 5261 Brassicaceae View MSA
123833749 5264 Brassicales-Malvales View MSA
124350232 5266 SBM View MSA
124245049 5268 Malvidae View MSA
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier