Gene : Brara.E01516 B. rapa FPsc v1.3
Defline:  (1 of 17) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  1516
Name:  ? Brara.E01516 Secondary Identifier:  ? PAC:30626388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01516 0.5kb upstream 0.5kb upstream 1940 true A05: 9904445-9906384 Brassica rapa FPsc
Brara.E01516 0.5kb upstream 0.5kb upstream 500 false A05: 9904445-9904944 Brassica rapa FPsc
Brara.E01516 0.5kb downstream 0.5kb downstream 1940 true A05: 9904945-9906884 Brassica rapa FPsc
Brara.E01516 0.5kb downstream 0.5kb downstream 500 false A05: 9906385-9906884 Brassica rapa FPsc
Brara.E01516 1.0kb upstream 1.0kb upstream 2440 true A05: 9903945-9906384 Brassica rapa FPsc
Brara.E01516 1.0kb upstream 1.0kb upstream 1000 false A05: 9903945-9904944 Brassica rapa FPsc
Brara.E01516 1.0kb downstream 1.0kb downstream 2440 true A05: 9904945-9907384 Brassica rapa FPsc
Brara.E01516 1.0kb downstream 1.0kb downstream 1000 false A05: 9906385-9907384 Brassica rapa FPsc
Brara.E01516 2.0kb upstream 2.0kb upstream 3440 true A05: 9902945-9906384 Brassica rapa FPsc
Brara.E01516 2.0kb upstream 2.0kb upstream 2000 false A05: 9902945-9904944 Brassica rapa FPsc
Brara.E01516 2.0kb downstream 2.0kb downstream 3440 true A05: 9904945-9908384 Brassica rapa FPsc
Brara.E01516 2.0kb downstream 2.0kb downstream 2000 false A05: 9906385-9908384 Brassica rapa FPsc
Brara.E01516 5.0kb upstream 5.0kb upstream 6440 true A05: 9899945-9906384 Brassica rapa FPsc
Brara.E01516 5.0kb upstream 5.0kb upstream 5000 false A05: 9899945-9904944 Brassica rapa FPsc
Brara.E01516 5.0kb downstream 5.0kb downstream 6440 true A05: 9904945-9911384 Brassica rapa FPsc
Brara.E01516 5.0kb downstream 5.0kb downstream 5000 false A05: 9906385-9911384 Brassica rapa FPsc
Brara.E01516 10.0kb upstream 10.0kb upstream 11440 true A05: 9894945-9906384 Brassica rapa FPsc
Brara.E01516 10.0kb upstream 10.0kb upstream 10000 false A05: 9894945-9904944 Brassica rapa FPsc
Brara.E01516 10.0kb downstream 10.0kb downstream 11440 true A05: 9904945-9916384 Brassica rapa FPsc
Brara.E01516 10.0kb downstream 10.0kb downstream 10000 false A05: 9906385-9916384 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122349788 5261 Brassicaceae Singleton cluster - no MSA
123788920 5264 Brassicales-Malvales Singleton cluster - no MSA
124286936 5266 SBM Singleton cluster - no MSA
124140710 5268 Malvidae Singleton cluster - no MSA
123867879 5270 Rosid Singleton cluster - no MSA
123452667 5271 Pentapetalae Singleton cluster - no MSA
122488151 5272 Eudicot Singleton cluster - no MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier