Gene : Brara.B03715 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  3715
Name:  ? Brara.B03715 Secondary Identifier:  ? PAC:30610822
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5129 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03715 0.5kb upstream 0.5kb upstream 5088 true A02: 30751292-30756379 Brassica rapa FPsc
Brara.B03715 0.5kb upstream 0.5kb upstream 500 false A02: 30751292-30751791 Brassica rapa FPsc
Brara.B03715 0.5kb downstream 0.5kb downstream 5088 true A02: 30751792-30756879 Brassica rapa FPsc
Brara.B03715 0.5kb downstream 0.5kb downstream 500 false A02: 30756380-30756879 Brassica rapa FPsc
Brara.B03715 1.0kb upstream 1.0kb upstream 5588 true A02: 30750792-30756379 Brassica rapa FPsc
Brara.B03715 1.0kb upstream 1.0kb upstream 1000 false A02: 30750792-30751791 Brassica rapa FPsc
Brara.B03715 1.0kb downstream 1.0kb downstream 5588 true A02: 30751792-30757379 Brassica rapa FPsc
Brara.B03715 1.0kb downstream 1.0kb downstream 1000 false A02: 30756380-30757379 Brassica rapa FPsc
Brara.B03715 2.0kb upstream 2.0kb upstream 6588 true A02: 30749792-30756379 Brassica rapa FPsc
Brara.B03715 2.0kb upstream 2.0kb upstream 2000 false A02: 30749792-30751791 Brassica rapa FPsc
Brara.B03715 2.0kb downstream 2.0kb downstream 6588 true A02: 30751792-30758379 Brassica rapa FPsc
Brara.B03715 2.0kb downstream 2.0kb downstream 2000 false A02: 30756380-30758379 Brassica rapa FPsc
Brara.B03715 5.0kb upstream 5.0kb upstream 9588 true A02: 30746792-30756379 Brassica rapa FPsc
Brara.B03715 5.0kb upstream 5.0kb upstream 5000 false A02: 30746792-30751791 Brassica rapa FPsc
Brara.B03715 5.0kb downstream 5.0kb downstream 9588 true A02: 30751792-30761379 Brassica rapa FPsc
Brara.B03715 5.0kb downstream 5.0kb downstream 5000 false A02: 30756380-30761379 Brassica rapa FPsc
Brara.B03715 10.0kb upstream 10.0kb upstream 14588 true A02: 30741792-30756379 Brassica rapa FPsc
Brara.B03715 10.0kb upstream 10.0kb upstream 10000 false A02: 30741792-30751791 Brassica rapa FPsc
Brara.B03715 10.0kb downstream 10.0kb downstream 14588 true A02: 30751792-30766379 Brassica rapa FPsc
Brara.B03715 10.0kb downstream 10.0kb downstream 10000 false A02: 30756380-30766379 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345736 5261 Brassicaceae Singleton cluster - no MSA
123785537 5264 Brassicales-Malvales Singleton cluster - no MSA
124283675 5266 SBM Singleton cluster - no MSA
124254227 5268 Malvidae View MSA
124074924 5270 Rosid View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier