Gene : Brara.I03347 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23084:SF145 - HISTONE H3 K4-SPECIFIC METHYLTRANSFERASE SET7/9 FAMILY PROTEIN Genomic Order:  3347
Name:  ? Brara.I03347 Secondary Identifier:  ? PAC:30641790
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03347 0.5kb upstream 0.5kb upstream 2235 true A09: 31845864-31848098 Brassica rapa FPsc
Brara.I03347 0.5kb upstream 0.5kb upstream 500 false A09: 31847599-31848098 Brassica rapa FPsc
Brara.I03347 0.5kb downstream 0.5kb downstream 2235 true A09: 31845364-31847598 Brassica rapa FPsc
Brara.I03347 0.5kb downstream 0.5kb downstream 500 false A09: 31845364-31845863 Brassica rapa FPsc
Brara.I03347 1.0kb upstream 1.0kb upstream 2735 true A09: 31845864-31848598 Brassica rapa FPsc
Brara.I03347 1.0kb upstream 1.0kb upstream 1000 false A09: 31847599-31848598 Brassica rapa FPsc
Brara.I03347 1.0kb downstream 1.0kb downstream 2735 true A09: 31844864-31847598 Brassica rapa FPsc
Brara.I03347 1.0kb downstream 1.0kb downstream 1000 false A09: 31844864-31845863 Brassica rapa FPsc
Brara.I03347 2.0kb upstream 2.0kb upstream 3735 true A09: 31845864-31849598 Brassica rapa FPsc
Brara.I03347 2.0kb upstream 2.0kb upstream 2000 false A09: 31847599-31849598 Brassica rapa FPsc
Brara.I03347 2.0kb downstream 2.0kb downstream 3735 true A09: 31843864-31847598 Brassica rapa FPsc
Brara.I03347 2.0kb downstream 2.0kb downstream 2000 false A09: 31843864-31845863 Brassica rapa FPsc
Brara.I03347 5.0kb upstream 5.0kb upstream 6735 true A09: 31845864-31852598 Brassica rapa FPsc
Brara.I03347 5.0kb upstream 5.0kb upstream 5000 false A09: 31847599-31852598 Brassica rapa FPsc
Brara.I03347 5.0kb downstream 5.0kb downstream 6735 true A09: 31840864-31847598 Brassica rapa FPsc
Brara.I03347 5.0kb downstream 5.0kb downstream 5000 false A09: 31840864-31845863 Brassica rapa FPsc
Brara.I03347 10.0kb upstream 10.0kb upstream 11735 true A09: 31845864-31857598 Brassica rapa FPsc
Brara.I03347 10.0kb upstream 10.0kb upstream 10000 false A09: 31847599-31857598 Brassica rapa FPsc
Brara.I03347 10.0kb downstream 10.0kb downstream 11735 true A09: 31835864-31847598 Brassica rapa FPsc
Brara.I03347 10.0kb downstream 10.0kb downstream 10000 false A09: 31835864-31845863 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360269 5261 Brassicaceae View MSA
123839023 5264 Brassicales-Malvales View MSA
124337793 5266 SBM View MSA
124241055 5268 Malvidae View MSA
124062192 5270 Rosid View MSA
123740472 5271 Pentapetalae View MSA
122790939 5272 Eudicot View MSA
122046556 5273 Angiosperm View MSA
121350119 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier