Gene : Brara.E01565 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR34191:SF3 - F6D8.10-RELATED Genomic Order:  1565
Name:  ? Brara.E01565 Secondary Identifier:  ? PAC:30627076
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01565 0.5kb upstream 0.5kb upstream 1695 true A05: 10400579-10402273 Brassica rapa FPsc
Brara.E01565 0.5kb upstream 0.5kb upstream 500 false A05: 10400579-10401078 Brassica rapa FPsc
Brara.E01565 0.5kb downstream 0.5kb downstream 1695 true A05: 10401079-10402773 Brassica rapa FPsc
Brara.E01565 0.5kb downstream 0.5kb downstream 500 false A05: 10402274-10402773 Brassica rapa FPsc
Brara.E01565 1.0kb upstream 1.0kb upstream 2195 true A05: 10400079-10402273 Brassica rapa FPsc
Brara.E01565 1.0kb upstream 1.0kb upstream 1000 false A05: 10400079-10401078 Brassica rapa FPsc
Brara.E01565 1.0kb downstream 1.0kb downstream 2195 true A05: 10401079-10403273 Brassica rapa FPsc
Brara.E01565 1.0kb downstream 1.0kb downstream 1000 false A05: 10402274-10403273 Brassica rapa FPsc
Brara.E01565 2.0kb upstream 2.0kb upstream 3195 true A05: 10399079-10402273 Brassica rapa FPsc
Brara.E01565 2.0kb upstream 2.0kb upstream 2000 false A05: 10399079-10401078 Brassica rapa FPsc
Brara.E01565 2.0kb downstream 2.0kb downstream 3195 true A05: 10401079-10404273 Brassica rapa FPsc
Brara.E01565 2.0kb downstream 2.0kb downstream 2000 false A05: 10402274-10404273 Brassica rapa FPsc
Brara.E01565 5.0kb upstream 5.0kb upstream 6195 true A05: 10396079-10402273 Brassica rapa FPsc
Brara.E01565 5.0kb upstream 5.0kb upstream 5000 false A05: 10396079-10401078 Brassica rapa FPsc
Brara.E01565 5.0kb downstream 5.0kb downstream 6195 true A05: 10401079-10407273 Brassica rapa FPsc
Brara.E01565 5.0kb downstream 5.0kb downstream 5000 false A05: 10402274-10407273 Brassica rapa FPsc
Brara.E01565 10.0kb upstream 10.0kb upstream 11195 true A05: 10391079-10402273 Brassica rapa FPsc
Brara.E01565 10.0kb upstream 10.0kb upstream 10000 false A05: 10391079-10401078 Brassica rapa FPsc
Brara.E01565 10.0kb downstream 10.0kb downstream 11195 true A05: 10401079-10412273 Brassica rapa FPsc
Brara.E01565 10.0kb downstream 10.0kb downstream 10000 false A05: 10402274-10412273 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377335 5261 Brassicaceae View MSA
123837740 5264 Brassicales-Malvales View MSA
124322348 5266 SBM View MSA
124248303 5268 Malvidae View MSA
124063227 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier