Gene : Brara.I03267 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  3267
Name:  ? Brara.I03267 Secondary Identifier:  ? PAC:30641036
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03267 0.5kb upstream 0.5kb upstream 3121 true A09: 31181072-31184192 Brassica rapa FPsc
Brara.I03267 0.5kb upstream 0.5kb upstream 500 false A09: 31183693-31184192 Brassica rapa FPsc
Brara.I03267 0.5kb downstream 0.5kb downstream 3121 true A09: 31180572-31183692 Brassica rapa FPsc
Brara.I03267 0.5kb downstream 0.5kb downstream 500 false A09: 31180572-31181071 Brassica rapa FPsc
Brara.I03267 1.0kb upstream 1.0kb upstream 3621 true A09: 31181072-31184692 Brassica rapa FPsc
Brara.I03267 1.0kb upstream 1.0kb upstream 1000 false A09: 31183693-31184692 Brassica rapa FPsc
Brara.I03267 1.0kb downstream 1.0kb downstream 3621 true A09: 31180072-31183692 Brassica rapa FPsc
Brara.I03267 1.0kb downstream 1.0kb downstream 1000 false A09: 31180072-31181071 Brassica rapa FPsc
Brara.I03267 2.0kb upstream 2.0kb upstream 4621 true A09: 31181072-31185692 Brassica rapa FPsc
Brara.I03267 2.0kb upstream 2.0kb upstream 2000 false A09: 31183693-31185692 Brassica rapa FPsc
Brara.I03267 2.0kb downstream 2.0kb downstream 4621 true A09: 31179072-31183692 Brassica rapa FPsc
Brara.I03267 2.0kb downstream 2.0kb downstream 2000 false A09: 31179072-31181071 Brassica rapa FPsc
Brara.I03267 5.0kb upstream 5.0kb upstream 7621 true A09: 31181072-31188692 Brassica rapa FPsc
Brara.I03267 5.0kb upstream 5.0kb upstream 5000 false A09: 31183693-31188692 Brassica rapa FPsc
Brara.I03267 5.0kb downstream 5.0kb downstream 7621 true A09: 31176072-31183692 Brassica rapa FPsc
Brara.I03267 5.0kb downstream 5.0kb downstream 5000 false A09: 31176072-31181071 Brassica rapa FPsc
Brara.I03267 10.0kb upstream 10.0kb upstream 12621 true A09: 31181072-31193692 Brassica rapa FPsc
Brara.I03267 10.0kb upstream 10.0kb upstream 10000 false A09: 31183693-31193692 Brassica rapa FPsc
Brara.I03267 10.0kb downstream 10.0kb downstream 12621 true A09: 31171072-31183692 Brassica rapa FPsc
Brara.I03267 10.0kb downstream 10.0kb downstream 10000 false A09: 31171072-31181071 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366355 5261 Brassicaceae View MSA
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier