Gene : Brara.E01452 B. rapa FPsc v1.3
Defline:  (1 of 5) PF01241 - Photosystem I psaG / psaK (PSI_PSAK) Genomic Order:  1452
Name:  ? Brara.E01452 Secondary Identifier:  ? PAC:30624837
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01452 0.5kb upstream 0.5kb upstream 7415 true A05: 9339096-9346510 Brassica rapa FPsc
Brara.E01452 0.5kb upstream 0.5kb upstream 500 false A05: 9339096-9339595 Brassica rapa FPsc
Brara.E01452 0.5kb downstream 0.5kb downstream 7415 true A05: 9339596-9347010 Brassica rapa FPsc
Brara.E01452 0.5kb downstream 0.5kb downstream 500 false A05: 9346511-9347010 Brassica rapa FPsc
Brara.E01452 1.0kb upstream 1.0kb upstream 7915 true A05: 9338596-9346510 Brassica rapa FPsc
Brara.E01452 1.0kb upstream 1.0kb upstream 1000 false A05: 9338596-9339595 Brassica rapa FPsc
Brara.E01452 1.0kb downstream 1.0kb downstream 7915 true A05: 9339596-9347510 Brassica rapa FPsc
Brara.E01452 1.0kb downstream 1.0kb downstream 1000 false A05: 9346511-9347510 Brassica rapa FPsc
Brara.E01452 2.0kb upstream 2.0kb upstream 8915 true A05: 9337596-9346510 Brassica rapa FPsc
Brara.E01452 2.0kb upstream 2.0kb upstream 2000 false A05: 9337596-9339595 Brassica rapa FPsc
Brara.E01452 2.0kb downstream 2.0kb downstream 8915 true A05: 9339596-9348510 Brassica rapa FPsc
Brara.E01452 2.0kb downstream 2.0kb downstream 2000 false A05: 9346511-9348510 Brassica rapa FPsc
Brara.E01452 5.0kb upstream 5.0kb upstream 11915 true A05: 9334596-9346510 Brassica rapa FPsc
Brara.E01452 5.0kb upstream 5.0kb upstream 5000 false A05: 9334596-9339595 Brassica rapa FPsc
Brara.E01452 5.0kb downstream 5.0kb downstream 11915 true A05: 9339596-9351510 Brassica rapa FPsc
Brara.E01452 5.0kb downstream 5.0kb downstream 5000 false A05: 9346511-9351510 Brassica rapa FPsc
Brara.E01452 10.0kb upstream 10.0kb upstream 16915 true A05: 9329596-9346510 Brassica rapa FPsc
Brara.E01452 10.0kb upstream 10.0kb upstream 10000 false A05: 9329596-9339595 Brassica rapa FPsc
Brara.E01452 10.0kb downstream 10.0kb downstream 16915 true A05: 9339596-9356510 Brassica rapa FPsc
Brara.E01452 10.0kb downstream 10.0kb downstream 10000 false A05: 9346511-9356510 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363876 5261 Brassicaceae View MSA
123841347 5264 Brassicales-Malvales View MSA
124341917 5266 SBM View MSA
124237433 5268 Malvidae View MSA
124067062 5270 Rosid View MSA
123737989 5271 Pentapetalae View MSA
122787886 5272 Eudicot View MSA
122046392 5273 Angiosperm View MSA
121348949 5274 Embryophyte View MSA
123425419 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier