Gene : Brara.E01443 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1443
Name:  ? Brara.E01443 Secondary Identifier:  ? PAC:30627403
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01443 0.5kb upstream 0.5kb upstream 1859 true A05: 9303764-9305622 Brassica rapa FPsc
Brara.E01443 0.5kb upstream 0.5kb upstream 500 false A05: 9305123-9305622 Brassica rapa FPsc
Brara.E01443 0.5kb downstream 0.5kb downstream 1859 true A05: 9303264-9305122 Brassica rapa FPsc
Brara.E01443 0.5kb downstream 0.5kb downstream 500 false A05: 9303264-9303763 Brassica rapa FPsc
Brara.E01443 1.0kb upstream 1.0kb upstream 2359 true A05: 9303764-9306122 Brassica rapa FPsc
Brara.E01443 1.0kb upstream 1.0kb upstream 1000 false A05: 9305123-9306122 Brassica rapa FPsc
Brara.E01443 1.0kb downstream 1.0kb downstream 2359 true A05: 9302764-9305122 Brassica rapa FPsc
Brara.E01443 1.0kb downstream 1.0kb downstream 1000 false A05: 9302764-9303763 Brassica rapa FPsc
Brara.E01443 2.0kb upstream 2.0kb upstream 3359 true A05: 9303764-9307122 Brassica rapa FPsc
Brara.E01443 2.0kb upstream 2.0kb upstream 2000 false A05: 9305123-9307122 Brassica rapa FPsc
Brara.E01443 2.0kb downstream 2.0kb downstream 3359 true A05: 9301764-9305122 Brassica rapa FPsc
Brara.E01443 2.0kb downstream 2.0kb downstream 2000 false A05: 9301764-9303763 Brassica rapa FPsc
Brara.E01443 5.0kb upstream 5.0kb upstream 6359 true A05: 9303764-9310122 Brassica rapa FPsc
Brara.E01443 5.0kb upstream 5.0kb upstream 5000 false A05: 9305123-9310122 Brassica rapa FPsc
Brara.E01443 5.0kb downstream 5.0kb downstream 6359 true A05: 9298764-9305122 Brassica rapa FPsc
Brara.E01443 5.0kb downstream 5.0kb downstream 5000 false A05: 9298764-9303763 Brassica rapa FPsc
Brara.E01443 10.0kb upstream 10.0kb upstream 11359 true A05: 9303764-9315122 Brassica rapa FPsc
Brara.E01443 10.0kb upstream 10.0kb upstream 10000 false A05: 9305123-9315122 Brassica rapa FPsc
Brara.E01443 10.0kb downstream 10.0kb downstream 11359 true A05: 9293764-9305122 Brassica rapa FPsc
Brara.E01443 10.0kb downstream 10.0kb downstream 10000 false A05: 9293764-9303763 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361676 5261 Brassicaceae View MSA
123798221 5264 Brassicales-Malvales View MSA
124295891 5266 SBM View MSA
124148202 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier