Gene : Brara.B03427 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  3427
Name:  ? Brara.B03427 Secondary Identifier:  ? PAC:30610492
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ILEUDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-922 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03427 0.5kb upstream 0.5kb upstream 3560 true A02: 28716287-28719846 Brassica rapa FPsc
Brara.B03427 0.5kb upstream 0.5kb upstream 500 false A02: 28719347-28719846 Brassica rapa FPsc
Brara.B03427 0.5kb downstream 0.5kb downstream 3560 true A02: 28715787-28719346 Brassica rapa FPsc
Brara.B03427 0.5kb downstream 0.5kb downstream 500 false A02: 28715787-28716286 Brassica rapa FPsc
Brara.B03427 1.0kb upstream 1.0kb upstream 4060 true A02: 28716287-28720346 Brassica rapa FPsc
Brara.B03427 1.0kb upstream 1.0kb upstream 1000 false A02: 28719347-28720346 Brassica rapa FPsc
Brara.B03427 1.0kb downstream 1.0kb downstream 4060 true A02: 28715287-28719346 Brassica rapa FPsc
Brara.B03427 1.0kb downstream 1.0kb downstream 1000 false A02: 28715287-28716286 Brassica rapa FPsc
Brara.B03427 2.0kb upstream 2.0kb upstream 5060 true A02: 28716287-28721346 Brassica rapa FPsc
Brara.B03427 2.0kb upstream 2.0kb upstream 2000 false A02: 28719347-28721346 Brassica rapa FPsc
Brara.B03427 2.0kb downstream 2.0kb downstream 5060 true A02: 28714287-28719346 Brassica rapa FPsc
Brara.B03427 2.0kb downstream 2.0kb downstream 2000 false A02: 28714287-28716286 Brassica rapa FPsc
Brara.B03427 5.0kb upstream 5.0kb upstream 8060 true A02: 28716287-28724346 Brassica rapa FPsc
Brara.B03427 5.0kb upstream 5.0kb upstream 5000 false A02: 28719347-28724346 Brassica rapa FPsc
Brara.B03427 5.0kb downstream 5.0kb downstream 8060 true A02: 28711287-28719346 Brassica rapa FPsc
Brara.B03427 5.0kb downstream 5.0kb downstream 5000 false A02: 28711287-28716286 Brassica rapa FPsc
Brara.B03427 10.0kb upstream 10.0kb upstream 13060 true A02: 28716287-28729346 Brassica rapa FPsc
Brara.B03427 10.0kb upstream 10.0kb upstream 10000 false A02: 28719347-28729346 Brassica rapa FPsc
Brara.B03427 10.0kb downstream 10.0kb downstream 13060 true A02: 28706287-28719346 Brassica rapa FPsc
Brara.B03427 10.0kb downstream 10.0kb downstream 10000 false A02: 28706287-28716286 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372970 5261 Brassicaceae View MSA
123829231 5264 Brassicales-Malvales View MSA
124338302 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier