Gene : Brara.I03061 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10593:SF43 - SHOOT GRAVITROPISM5-LIKE PROTEIN Genomic Order:  3061
Name:  ? Brara.I03061 Secondary Identifier:  ? PAC:30642975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03061 0.5kb upstream 0.5kb upstream 3160 true A09: 29552085-29555244 Brassica rapa FPsc
Brara.I03061 0.5kb upstream 0.5kb upstream 500 false A09: 29552085-29552584 Brassica rapa FPsc
Brara.I03061 0.5kb downstream 0.5kb downstream 3160 true A09: 29552585-29555744 Brassica rapa FPsc
Brara.I03061 0.5kb downstream 0.5kb downstream 500 false A09: 29555245-29555744 Brassica rapa FPsc
Brara.I03061 1.0kb upstream 1.0kb upstream 3660 true A09: 29551585-29555244 Brassica rapa FPsc
Brara.I03061 1.0kb upstream 1.0kb upstream 1000 false A09: 29551585-29552584 Brassica rapa FPsc
Brara.I03061 1.0kb downstream 1.0kb downstream 3660 true A09: 29552585-29556244 Brassica rapa FPsc
Brara.I03061 1.0kb downstream 1.0kb downstream 1000 false A09: 29555245-29556244 Brassica rapa FPsc
Brara.I03061 2.0kb upstream 2.0kb upstream 4660 true A09: 29550585-29555244 Brassica rapa FPsc
Brara.I03061 2.0kb upstream 2.0kb upstream 2000 false A09: 29550585-29552584 Brassica rapa FPsc
Brara.I03061 2.0kb downstream 2.0kb downstream 4660 true A09: 29552585-29557244 Brassica rapa FPsc
Brara.I03061 2.0kb downstream 2.0kb downstream 2000 false A09: 29555245-29557244 Brassica rapa FPsc
Brara.I03061 5.0kb upstream 5.0kb upstream 7660 true A09: 29547585-29555244 Brassica rapa FPsc
Brara.I03061 5.0kb upstream 5.0kb upstream 5000 false A09: 29547585-29552584 Brassica rapa FPsc
Brara.I03061 5.0kb downstream 5.0kb downstream 7660 true A09: 29552585-29560244 Brassica rapa FPsc
Brara.I03061 5.0kb downstream 5.0kb downstream 5000 false A09: 29555245-29560244 Brassica rapa FPsc
Brara.I03061 10.0kb upstream 10.0kb upstream 12660 true A09: 29542585-29555244 Brassica rapa FPsc
Brara.I03061 10.0kb upstream 10.0kb upstream 10000 false A09: 29542585-29552584 Brassica rapa FPsc
Brara.I03061 10.0kb downstream 10.0kb downstream 12660 true A09: 29552585-29565244 Brassica rapa FPsc
Brara.I03061 10.0kb downstream 10.0kb downstream 10000 false A09: 29555245-29565244 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353797 5261 Brassicaceae Singleton cluster - no MSA
123792304 5264 Brassicales-Malvales Singleton cluster - no MSA
124290182 5266 SBM Singleton cluster - no MSA
124255894 5268 Malvidae View MSA
124038864 5270 Rosid View MSA
123753156 5271 Pentapetalae View MSA
122787827 5272 Eudicot View MSA
122044064 5273 Angiosperm View MSA
121351060 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier