Gene : Brara.I03057 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  3057
Name:  ? Brara.I03057 Secondary Identifier:  ? PAC:30643458
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRPSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03057 0.5kb upstream 0.5kb upstream 2581 true A09: 29512182-29514762 Brassica rapa FPsc
Brara.I03057 0.5kb upstream 0.5kb upstream 500 false A09: 29514263-29514762 Brassica rapa FPsc
Brara.I03057 0.5kb downstream 0.5kb downstream 2581 true A09: 29511682-29514262 Brassica rapa FPsc
Brara.I03057 0.5kb downstream 0.5kb downstream 500 false A09: 29511682-29512181 Brassica rapa FPsc
Brara.I03057 1.0kb upstream 1.0kb upstream 3081 true A09: 29512182-29515262 Brassica rapa FPsc
Brara.I03057 1.0kb upstream 1.0kb upstream 1000 false A09: 29514263-29515262 Brassica rapa FPsc
Brara.I03057 1.0kb downstream 1.0kb downstream 3081 true A09: 29511182-29514262 Brassica rapa FPsc
Brara.I03057 1.0kb downstream 1.0kb downstream 1000 false A09: 29511182-29512181 Brassica rapa FPsc
Brara.I03057 2.0kb upstream 2.0kb upstream 4081 true A09: 29512182-29516262 Brassica rapa FPsc
Brara.I03057 2.0kb upstream 2.0kb upstream 2000 false A09: 29514263-29516262 Brassica rapa FPsc
Brara.I03057 2.0kb downstream 2.0kb downstream 4081 true A09: 29510182-29514262 Brassica rapa FPsc
Brara.I03057 2.0kb downstream 2.0kb downstream 2000 false A09: 29510182-29512181 Brassica rapa FPsc
Brara.I03057 5.0kb upstream 5.0kb upstream 7081 true A09: 29512182-29519262 Brassica rapa FPsc
Brara.I03057 5.0kb upstream 5.0kb upstream 5000 false A09: 29514263-29519262 Brassica rapa FPsc
Brara.I03057 5.0kb downstream 5.0kb downstream 7081 true A09: 29507182-29514262 Brassica rapa FPsc
Brara.I03057 5.0kb downstream 5.0kb downstream 5000 false A09: 29507182-29512181 Brassica rapa FPsc
Brara.I03057 10.0kb upstream 10.0kb upstream 12081 true A09: 29512182-29524262 Brassica rapa FPsc
Brara.I03057 10.0kb upstream 10.0kb upstream 10000 false A09: 29514263-29524262 Brassica rapa FPsc
Brara.I03057 10.0kb downstream 10.0kb downstream 12081 true A09: 29502182-29514262 Brassica rapa FPsc
Brara.I03057 10.0kb downstream 10.0kb downstream 10000 false A09: 29502182-29512181 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353910 5261 Brassicaceae Singleton cluster - no MSA
123842628 5264 Brassicales-Malvales View MSA
124323651 5266 SBM View MSA
124169572 5268 Malvidae View MSA
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier