Gene : Brara.I03073 B. rapa FPsc v1.3
Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  3073
Name:  ? Brara.I03073 Secondary Identifier:  ? PAC:30643743
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03073 0.5kb upstream 0.5kb upstream 5778 true A09: 29627080-29632857 Brassica rapa FPsc
Brara.I03073 0.5kb upstream 0.5kb upstream 500 false A09: 29632358-29632857 Brassica rapa FPsc
Brara.I03073 0.5kb downstream 0.5kb downstream 5778 true A09: 29626580-29632357 Brassica rapa FPsc
Brara.I03073 0.5kb downstream 0.5kb downstream 500 false A09: 29626580-29627079 Brassica rapa FPsc
Brara.I03073 1.0kb upstream 1.0kb upstream 6278 true A09: 29627080-29633357 Brassica rapa FPsc
Brara.I03073 1.0kb upstream 1.0kb upstream 1000 false A09: 29632358-29633357 Brassica rapa FPsc
Brara.I03073 1.0kb downstream 1.0kb downstream 6278 true A09: 29626080-29632357 Brassica rapa FPsc
Brara.I03073 1.0kb downstream 1.0kb downstream 1000 false A09: 29626080-29627079 Brassica rapa FPsc
Brara.I03073 2.0kb upstream 2.0kb upstream 7278 true A09: 29627080-29634357 Brassica rapa FPsc
Brara.I03073 2.0kb upstream 2.0kb upstream 2000 false A09: 29632358-29634357 Brassica rapa FPsc
Brara.I03073 2.0kb downstream 2.0kb downstream 7278 true A09: 29625080-29632357 Brassica rapa FPsc
Brara.I03073 2.0kb downstream 2.0kb downstream 2000 false A09: 29625080-29627079 Brassica rapa FPsc
Brara.I03073 5.0kb upstream 5.0kb upstream 10278 true A09: 29627080-29637357 Brassica rapa FPsc
Brara.I03073 5.0kb upstream 5.0kb upstream 5000 false A09: 29632358-29637357 Brassica rapa FPsc
Brara.I03073 5.0kb downstream 5.0kb downstream 10278 true A09: 29622080-29632357 Brassica rapa FPsc
Brara.I03073 5.0kb downstream 5.0kb downstream 5000 false A09: 29622080-29627079 Brassica rapa FPsc
Brara.I03073 10.0kb upstream 10.0kb upstream 15278 true A09: 29627080-29642357 Brassica rapa FPsc
Brara.I03073 10.0kb upstream 10.0kb upstream 10000 false A09: 29632358-29642357 Brassica rapa FPsc
Brara.I03073 10.0kb downstream 10.0kb downstream 15278 true A09: 29617080-29632357 Brassica rapa FPsc
Brara.I03073 10.0kb downstream 10.0kb downstream 10000 false A09: 29617080-29627079 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369642 5261 Brassicaceae View MSA
123834323 5264 Brassicales-Malvales View MSA
124337419 5266 SBM View MSA
124240630 5268 Malvidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier