Gene : Brara.B03469 B. rapa FPsc v1.3
Defline:  (1 of 4) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  3469
Name:  ? Brara.B03469 Secondary Identifier:  ? PAC:30609163
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03469 0.5kb upstream 0.5kb upstream 11234 true A02: 28980022-28991255 Brassica rapa FPsc
Brara.B03469 0.5kb upstream 0.5kb upstream 500 false A02: 28990756-28991255 Brassica rapa FPsc
Brara.B03469 0.5kb downstream 0.5kb downstream 11234 true A02: 28979522-28990755 Brassica rapa FPsc
Brara.B03469 0.5kb downstream 0.5kb downstream 500 false A02: 28979522-28980021 Brassica rapa FPsc
Brara.B03469 1.0kb upstream 1.0kb upstream 11734 true A02: 28980022-28991755 Brassica rapa FPsc
Brara.B03469 1.0kb upstream 1.0kb upstream 1000 false A02: 28990756-28991755 Brassica rapa FPsc
Brara.B03469 1.0kb downstream 1.0kb downstream 11734 true A02: 28979022-28990755 Brassica rapa FPsc
Brara.B03469 1.0kb downstream 1.0kb downstream 1000 false A02: 28979022-28980021 Brassica rapa FPsc
Brara.B03469 2.0kb upstream 2.0kb upstream 12734 true A02: 28980022-28992755 Brassica rapa FPsc
Brara.B03469 2.0kb upstream 2.0kb upstream 2000 false A02: 28990756-28992755 Brassica rapa FPsc
Brara.B03469 2.0kb downstream 2.0kb downstream 12734 true A02: 28978022-28990755 Brassica rapa FPsc
Brara.B03469 2.0kb downstream 2.0kb downstream 2000 false A02: 28978022-28980021 Brassica rapa FPsc
Brara.B03469 5.0kb upstream 5.0kb upstream 15734 true A02: 28980022-28995755 Brassica rapa FPsc
Brara.B03469 5.0kb upstream 5.0kb upstream 5000 false A02: 28990756-28995755 Brassica rapa FPsc
Brara.B03469 5.0kb downstream 5.0kb downstream 15734 true A02: 28975022-28990755 Brassica rapa FPsc
Brara.B03469 5.0kb downstream 5.0kb downstream 5000 false A02: 28975022-28980021 Brassica rapa FPsc
Brara.B03469 10.0kb upstream 10.0kb upstream 20734 true A02: 28980022-29000755 Brassica rapa FPsc
Brara.B03469 10.0kb upstream 10.0kb upstream 10000 false A02: 28990756-29000755 Brassica rapa FPsc
Brara.B03469 10.0kb downstream 10.0kb downstream 20734 true A02: 28970022-28990755 Brassica rapa FPsc
Brara.B03469 10.0kb downstream 10.0kb downstream 10000 false A02: 28970022-28980021 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345218 5261 Brassicaceae Singleton cluster - no MSA
123785102 5264 Brassicales-Malvales Singleton cluster - no MSA
124283257 5266 SBM Singleton cluster - no MSA
124137692 5268 Malvidae Singleton cluster - no MSA
123865370 5270 Rosid Singleton cluster - no MSA
123450559 5271 Pentapetalae Singleton cluster - no MSA
122486080 5272 Eudicot Singleton cluster - no MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier