Gene : Brara.B03467 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  3467
Name:  ? Brara.B03467 Secondary Identifier:  ? PAC:30609573
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5381 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5695 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6596 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6606 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6608 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7185 Brassica rapa FPsc pathologic  
BrapaFPsc SALVADEHYPOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03467 0.5kb upstream 0.5kb upstream 4401 true A02: 28966743-28971143 Brassica rapa FPsc
Brara.B03467 0.5kb upstream 0.5kb upstream 500 false A02: 28966743-28967242 Brassica rapa FPsc
Brara.B03467 0.5kb downstream 0.5kb downstream 4401 true A02: 28967243-28971643 Brassica rapa FPsc
Brara.B03467 0.5kb downstream 0.5kb downstream 500 false A02: 28971144-28971643 Brassica rapa FPsc
Brara.B03467 1.0kb upstream 1.0kb upstream 4901 true A02: 28966243-28971143 Brassica rapa FPsc
Brara.B03467 1.0kb upstream 1.0kb upstream 1000 false A02: 28966243-28967242 Brassica rapa FPsc
Brara.B03467 1.0kb downstream 1.0kb downstream 4901 true A02: 28967243-28972143 Brassica rapa FPsc
Brara.B03467 1.0kb downstream 1.0kb downstream 1000 false A02: 28971144-28972143 Brassica rapa FPsc
Brara.B03467 2.0kb upstream 2.0kb upstream 5901 true A02: 28965243-28971143 Brassica rapa FPsc
Brara.B03467 2.0kb upstream 2.0kb upstream 2000 false A02: 28965243-28967242 Brassica rapa FPsc
Brara.B03467 2.0kb downstream 2.0kb downstream 5901 true A02: 28967243-28973143 Brassica rapa FPsc
Brara.B03467 2.0kb downstream 2.0kb downstream 2000 false A02: 28971144-28973143 Brassica rapa FPsc
Brara.B03467 5.0kb upstream 5.0kb upstream 8901 true A02: 28962243-28971143 Brassica rapa FPsc
Brara.B03467 5.0kb upstream 5.0kb upstream 5000 false A02: 28962243-28967242 Brassica rapa FPsc
Brara.B03467 5.0kb downstream 5.0kb downstream 8901 true A02: 28967243-28976143 Brassica rapa FPsc
Brara.B03467 5.0kb downstream 5.0kb downstream 5000 false A02: 28971144-28976143 Brassica rapa FPsc
Brara.B03467 10.0kb upstream 10.0kb upstream 13901 true A02: 28957243-28971143 Brassica rapa FPsc
Brara.B03467 10.0kb upstream 10.0kb upstream 10000 false A02: 28957243-28967242 Brassica rapa FPsc
Brara.B03467 10.0kb downstream 10.0kb downstream 13901 true A02: 28967243-28981143 Brassica rapa FPsc
Brara.B03467 10.0kb downstream 10.0kb downstream 10000 false A02: 28971144-28981143 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372227 5261 Brassicaceae View MSA
123831857 5264 Brassicales-Malvales View MSA
124339151 5266 SBM View MSA
124240270 5268 Malvidae View MSA
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier