Gene : Brara.B03280 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10266 - CYTOCHROME C1 Genomic Order:  3280
Name:  ? Brara.B03280 Secondary Identifier:  ? PAC:30610592
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03280 0.5kb upstream 0.5kb upstream 2744 true A02: 27592139-27594882 Brassica rapa FPsc
Brara.B03280 0.5kb upstream 0.5kb upstream 500 false A02: 27594383-27594882 Brassica rapa FPsc
Brara.B03280 0.5kb downstream 0.5kb downstream 2744 true A02: 27591639-27594382 Brassica rapa FPsc
Brara.B03280 0.5kb downstream 0.5kb downstream 500 false A02: 27591639-27592138 Brassica rapa FPsc
Brara.B03280 1.0kb upstream 1.0kb upstream 3244 true A02: 27592139-27595382 Brassica rapa FPsc
Brara.B03280 1.0kb upstream 1.0kb upstream 1000 false A02: 27594383-27595382 Brassica rapa FPsc
Brara.B03280 1.0kb downstream 1.0kb downstream 3244 true A02: 27591139-27594382 Brassica rapa FPsc
Brara.B03280 1.0kb downstream 1.0kb downstream 1000 false A02: 27591139-27592138 Brassica rapa FPsc
Brara.B03280 2.0kb upstream 2.0kb upstream 4244 true A02: 27592139-27596382 Brassica rapa FPsc
Brara.B03280 2.0kb upstream 2.0kb upstream 2000 false A02: 27594383-27596382 Brassica rapa FPsc
Brara.B03280 2.0kb downstream 2.0kb downstream 4244 true A02: 27590139-27594382 Brassica rapa FPsc
Brara.B03280 2.0kb downstream 2.0kb downstream 2000 false A02: 27590139-27592138 Brassica rapa FPsc
Brara.B03280 5.0kb upstream 5.0kb upstream 7244 true A02: 27592139-27599382 Brassica rapa FPsc
Brara.B03280 5.0kb upstream 5.0kb upstream 5000 false A02: 27594383-27599382 Brassica rapa FPsc
Brara.B03280 5.0kb downstream 5.0kb downstream 7244 true A02: 27587139-27594382 Brassica rapa FPsc
Brara.B03280 5.0kb downstream 5.0kb downstream 5000 false A02: 27587139-27592138 Brassica rapa FPsc
Brara.B03280 10.0kb upstream 10.0kb upstream 12244 true A02: 27592139-27604382 Brassica rapa FPsc
Brara.B03280 10.0kb upstream 10.0kb upstream 10000 false A02: 27594383-27604382 Brassica rapa FPsc
Brara.B03280 10.0kb downstream 10.0kb downstream 12244 true A02: 27582139-27594382 Brassica rapa FPsc
Brara.B03280 10.0kb downstream 10.0kb downstream 10000 false A02: 27582139-27592138 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376312 5261 Brassicaceae View MSA
123830928 5264 Brassicales-Malvales View MSA
124345956 5266 SBM View MSA
124248685 5268 Malvidae View MSA
124073211 5270 Rosid View MSA
123745446 5271 Pentapetalae View MSA
122788425 5272 Eudicot View MSA
122048813 5273 Angiosperm View MSA
121344559 5274 Embryophyte View MSA
123427665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier