Gene : Brara.E01320 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Genomic Order:  1320
Name:  ? Brara.E01320 Secondary Identifier:  ? PAC:30625389
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01320 0.5kb upstream 0.5kb upstream 5284 true A05: 8162767-8168050 Brassica rapa FPsc
Brara.E01320 0.5kb upstream 0.5kb upstream 500 false A05: 8162767-8163266 Brassica rapa FPsc
Brara.E01320 0.5kb downstream 0.5kb downstream 5284 true A05: 8163267-8168550 Brassica rapa FPsc
Brara.E01320 0.5kb downstream 0.5kb downstream 500 false A05: 8168051-8168550 Brassica rapa FPsc
Brara.E01320 1.0kb upstream 1.0kb upstream 5784 true A05: 8162267-8168050 Brassica rapa FPsc
Brara.E01320 1.0kb upstream 1.0kb upstream 1000 false A05: 8162267-8163266 Brassica rapa FPsc
Brara.E01320 1.0kb downstream 1.0kb downstream 5784 true A05: 8163267-8169050 Brassica rapa FPsc
Brara.E01320 1.0kb downstream 1.0kb downstream 1000 false A05: 8168051-8169050 Brassica rapa FPsc
Brara.E01320 2.0kb upstream 2.0kb upstream 6784 true A05: 8161267-8168050 Brassica rapa FPsc
Brara.E01320 2.0kb upstream 2.0kb upstream 2000 false A05: 8161267-8163266 Brassica rapa FPsc
Brara.E01320 2.0kb downstream 2.0kb downstream 6784 true A05: 8163267-8170050 Brassica rapa FPsc
Brara.E01320 2.0kb downstream 2.0kb downstream 2000 false A05: 8168051-8170050 Brassica rapa FPsc
Brara.E01320 5.0kb upstream 5.0kb upstream 9784 true A05: 8158267-8168050 Brassica rapa FPsc
Brara.E01320 5.0kb upstream 5.0kb upstream 5000 false A05: 8158267-8163266 Brassica rapa FPsc
Brara.E01320 5.0kb downstream 5.0kb downstream 9784 true A05: 8163267-8173050 Brassica rapa FPsc
Brara.E01320 5.0kb downstream 5.0kb downstream 5000 false A05: 8168051-8173050 Brassica rapa FPsc
Brara.E01320 10.0kb upstream 10.0kb upstream 14784 true A05: 8153267-8168050 Brassica rapa FPsc
Brara.E01320 10.0kb upstream 10.0kb upstream 10000 false A05: 8153267-8163266 Brassica rapa FPsc
Brara.E01320 10.0kb downstream 10.0kb downstream 14784 true A05: 8163267-8178050 Brassica rapa FPsc
Brara.E01320 10.0kb downstream 10.0kb downstream 10000 false A05: 8168051-8178050 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349578 5261 Brassicaceae Singleton cluster - no MSA
123788741 5264 Brassicales-Malvales Singleton cluster - no MSA
124286761 5266 SBM Singleton cluster - no MSA
124140565 5268 Malvidae Singleton cluster - no MSA
123867761 5270 Rosid Singleton cluster - no MSA
123452565 5271 Pentapetalae Singleton cluster - no MSA
122798303 5272 Eudicot View MSA
122051826 5273 Angiosperm View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier