Gene : Brara.I02673 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR35703:SF1 - INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED Genomic Order:  2673
Name:  ? Brara.I02673 Secondary Identifier:  ? PAC:30646833
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5874 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02673 0.5kb upstream 0.5kb upstream 2251 true A09: 25334638-25336888 Brassica rapa FPsc
Brara.I02673 0.5kb upstream 0.5kb upstream 500 false A09: 25336389-25336888 Brassica rapa FPsc
Brara.I02673 0.5kb downstream 0.5kb downstream 2251 true A09: 25334138-25336388 Brassica rapa FPsc
Brara.I02673 0.5kb downstream 0.5kb downstream 500 false A09: 25334138-25334637 Brassica rapa FPsc
Brara.I02673 1.0kb upstream 1.0kb upstream 2751 true A09: 25334638-25337388 Brassica rapa FPsc
Brara.I02673 1.0kb upstream 1.0kb upstream 1000 false A09: 25336389-25337388 Brassica rapa FPsc
Brara.I02673 1.0kb downstream 1.0kb downstream 2751 true A09: 25333638-25336388 Brassica rapa FPsc
Brara.I02673 1.0kb downstream 1.0kb downstream 1000 false A09: 25333638-25334637 Brassica rapa FPsc
Brara.I02673 2.0kb upstream 2.0kb upstream 3751 true A09: 25334638-25338388 Brassica rapa FPsc
Brara.I02673 2.0kb upstream 2.0kb upstream 2000 false A09: 25336389-25338388 Brassica rapa FPsc
Brara.I02673 2.0kb downstream 2.0kb downstream 3751 true A09: 25332638-25336388 Brassica rapa FPsc
Brara.I02673 2.0kb downstream 2.0kb downstream 2000 false A09: 25332638-25334637 Brassica rapa FPsc
Brara.I02673 5.0kb upstream 5.0kb upstream 6751 true A09: 25334638-25341388 Brassica rapa FPsc
Brara.I02673 5.0kb upstream 5.0kb upstream 5000 false A09: 25336389-25341388 Brassica rapa FPsc
Brara.I02673 5.0kb downstream 5.0kb downstream 6751 true A09: 25329638-25336388 Brassica rapa FPsc
Brara.I02673 5.0kb downstream 5.0kb downstream 5000 false A09: 25329638-25334637 Brassica rapa FPsc
Brara.I02673 10.0kb upstream 10.0kb upstream 11751 true A09: 25334638-25346388 Brassica rapa FPsc
Brara.I02673 10.0kb upstream 10.0kb upstream 10000 false A09: 25336389-25346388 Brassica rapa FPsc
Brara.I02673 10.0kb downstream 10.0kb downstream 11751 true A09: 25324638-25336388 Brassica rapa FPsc
Brara.I02673 10.0kb downstream 10.0kb downstream 10000 false A09: 25324638-25334637 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374362 5261 Brassicaceae View MSA
123837004 5264 Brassicales-Malvales View MSA
124341792 5266 SBM View MSA
124242184 5268 Malvidae View MSA
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier