Gene : Brara.E01342 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21660//PTHR21660:SF8 - THIOESTERASE SUPERFAMILY MEMBER-RELATED Genomic Order:  1342
Name:  ? Brara.E01342 Secondary Identifier:  ? PAC:30627302
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5148 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01342 0.5kb upstream 0.5kb upstream 1416 true A05: 8363323-8364738 Brassica rapa FPsc
Brara.E01342 0.5kb upstream 0.5kb upstream 500 false A05: 8363323-8363822 Brassica rapa FPsc
Brara.E01342 0.5kb downstream 0.5kb downstream 1416 true A05: 8363823-8365238 Brassica rapa FPsc
Brara.E01342 0.5kb downstream 0.5kb downstream 500 false A05: 8364739-8365238 Brassica rapa FPsc
Brara.E01342 1.0kb upstream 1.0kb upstream 1916 true A05: 8362823-8364738 Brassica rapa FPsc
Brara.E01342 1.0kb upstream 1.0kb upstream 1000 false A05: 8362823-8363822 Brassica rapa FPsc
Brara.E01342 1.0kb downstream 1.0kb downstream 1916 true A05: 8363823-8365738 Brassica rapa FPsc
Brara.E01342 1.0kb downstream 1.0kb downstream 1000 false A05: 8364739-8365738 Brassica rapa FPsc
Brara.E01342 2.0kb upstream 2.0kb upstream 2916 true A05: 8361823-8364738 Brassica rapa FPsc
Brara.E01342 2.0kb upstream 2.0kb upstream 2000 false A05: 8361823-8363822 Brassica rapa FPsc
Brara.E01342 2.0kb downstream 2.0kb downstream 2916 true A05: 8363823-8366738 Brassica rapa FPsc
Brara.E01342 2.0kb downstream 2.0kb downstream 2000 false A05: 8364739-8366738 Brassica rapa FPsc
Brara.E01342 5.0kb upstream 5.0kb upstream 5916 true A05: 8358823-8364738 Brassica rapa FPsc
Brara.E01342 5.0kb upstream 5.0kb upstream 5000 false A05: 8358823-8363822 Brassica rapa FPsc
Brara.E01342 5.0kb downstream 5.0kb downstream 5916 true A05: 8363823-8369738 Brassica rapa FPsc
Brara.E01342 5.0kb downstream 5.0kb downstream 5000 false A05: 8364739-8369738 Brassica rapa FPsc
Brara.E01342 10.0kb upstream 10.0kb upstream 10916 true A05: 8353823-8364738 Brassica rapa FPsc
Brara.E01342 10.0kb upstream 10.0kb upstream 10000 false A05: 8353823-8363822 Brassica rapa FPsc
Brara.E01342 10.0kb downstream 10.0kb downstream 10916 true A05: 8363823-8374738 Brassica rapa FPsc
Brara.E01342 10.0kb downstream 10.0kb downstream 10000 false A05: 8364739-8374738 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370510 5261 Brassicaceae View MSA
123835425 5264 Brassicales-Malvales View MSA
124342263 5266 SBM View MSA
124242669 5268 Malvidae View MSA
124068313 5270 Rosid View MSA
123746035 5271 Pentapetalae View MSA
122788849 5272 Eudicot View MSA
122042394 5273 Angiosperm View MSA
121309957 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier