Gene : Brara.E01334 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11926:SF283 - UDP-GLYCOSYLTRANSFERASE 71D1-RELATED Genomic Order:  1334
Name:  ? Brara.E01334 Secondary Identifier:  ? PAC:30627068
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5390 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7055 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7140 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01334 0.5kb upstream 0.5kb upstream 1901 true A05: 8287402-8289302 Brassica rapa FPsc
Brara.E01334 0.5kb upstream 0.5kb upstream 500 false A05: 8288803-8289302 Brassica rapa FPsc
Brara.E01334 0.5kb downstream 0.5kb downstream 1901 true A05: 8286902-8288802 Brassica rapa FPsc
Brara.E01334 0.5kb downstream 0.5kb downstream 500 false A05: 8286902-8287401 Brassica rapa FPsc
Brara.E01334 1.0kb upstream 1.0kb upstream 2401 true A05: 8287402-8289802 Brassica rapa FPsc
Brara.E01334 1.0kb upstream 1.0kb upstream 1000 false A05: 8288803-8289802 Brassica rapa FPsc
Brara.E01334 1.0kb downstream 1.0kb downstream 2401 true A05: 8286402-8288802 Brassica rapa FPsc
Brara.E01334 1.0kb downstream 1.0kb downstream 1000 false A05: 8286402-8287401 Brassica rapa FPsc
Brara.E01334 2.0kb upstream 2.0kb upstream 3401 true A05: 8287402-8290802 Brassica rapa FPsc
Brara.E01334 2.0kb upstream 2.0kb upstream 2000 false A05: 8288803-8290802 Brassica rapa FPsc
Brara.E01334 2.0kb downstream 2.0kb downstream 3401 true A05: 8285402-8288802 Brassica rapa FPsc
Brara.E01334 2.0kb downstream 2.0kb downstream 2000 false A05: 8285402-8287401 Brassica rapa FPsc
Brara.E01334 5.0kb upstream 5.0kb upstream 6401 true A05: 8287402-8293802 Brassica rapa FPsc
Brara.E01334 5.0kb upstream 5.0kb upstream 5000 false A05: 8288803-8293802 Brassica rapa FPsc
Brara.E01334 5.0kb downstream 5.0kb downstream 6401 true A05: 8282402-8288802 Brassica rapa FPsc
Brara.E01334 5.0kb downstream 5.0kb downstream 5000 false A05: 8282402-8287401 Brassica rapa FPsc
Brara.E01334 10.0kb upstream 10.0kb upstream 11401 true A05: 8287402-8298802 Brassica rapa FPsc
Brara.E01334 10.0kb upstream 10.0kb upstream 10000 false A05: 8288803-8298802 Brassica rapa FPsc
Brara.E01334 10.0kb downstream 10.0kb downstream 11401 true A05: 8277402-8288802 Brassica rapa FPsc
Brara.E01334 10.0kb downstream 10.0kb downstream 10000 false A05: 8277402-8287401 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368442 5261 Brassicaceae View MSA
123840802 5264 Brassicales-Malvales View MSA
124349707 5266 SBM View MSA
124247034 5268 Malvidae View MSA
124067865 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier