Gene : Brara.I04444 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00271//PF00385//PF00628//PF04851//PF06461//PF06465 - Helicase conserved C-terminal domain (Helicase_C) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // PHD-finger (PHD) // Type III restriction enzyme, res subunit (ResIII) // Domain of Unknown Function (DUF1086) (DUF1086) // Domain of Unknown Function (DUF1087) (DUF1087) Genomic Order:  4444
Name:  ? Brara.I04444 Secondary Identifier:  ? PAC:30645525
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04444 0.5kb upstream 0.5kb upstream 8919 true A09: 38624309-38633227 Brassica rapa FPsc
Brara.I04444 0.5kb upstream 0.5kb upstream 500 false A09: 38632728-38633227 Brassica rapa FPsc
Brara.I04444 0.5kb downstream 0.5kb downstream 8919 true A09: 38623809-38632727 Brassica rapa FPsc
Brara.I04444 0.5kb downstream 0.5kb downstream 500 false A09: 38623809-38624308 Brassica rapa FPsc
Brara.I04444 1.0kb upstream 1.0kb upstream 9419 true A09: 38624309-38633727 Brassica rapa FPsc
Brara.I04444 1.0kb upstream 1.0kb upstream 1000 false A09: 38632728-38633727 Brassica rapa FPsc
Brara.I04444 1.0kb downstream 1.0kb downstream 9419 true A09: 38623309-38632727 Brassica rapa FPsc
Brara.I04444 1.0kb downstream 1.0kb downstream 1000 false A09: 38623309-38624308 Brassica rapa FPsc
Brara.I04444 2.0kb upstream 2.0kb upstream 10419 true A09: 38624309-38634727 Brassica rapa FPsc
Brara.I04444 2.0kb upstream 2.0kb upstream 2000 false A09: 38632728-38634727 Brassica rapa FPsc
Brara.I04444 2.0kb downstream 2.0kb downstream 10419 true A09: 38622309-38632727 Brassica rapa FPsc
Brara.I04444 2.0kb downstream 2.0kb downstream 2000 false A09: 38622309-38624308 Brassica rapa FPsc
Brara.I04444 5.0kb upstream 5.0kb upstream 13419 true A09: 38624309-38637727 Brassica rapa FPsc
Brara.I04444 5.0kb upstream 5.0kb upstream 5000 false A09: 38632728-38637727 Brassica rapa FPsc
Brara.I04444 5.0kb downstream 5.0kb downstream 13419 true A09: 38619309-38632727 Brassica rapa FPsc
Brara.I04444 5.0kb downstream 5.0kb downstream 5000 false A09: 38619309-38624308 Brassica rapa FPsc
Brara.I04444 10.0kb upstream 10.0kb upstream 18419 true A09: 38624309-38642727 Brassica rapa FPsc
Brara.I04444 10.0kb upstream 10.0kb upstream 10000 false A09: 38632728-38642727 Brassica rapa FPsc
Brara.I04444 10.0kb downstream 10.0kb downstream 18419 true A09: 38614309-38632727 Brassica rapa FPsc
Brara.I04444 10.0kb downstream 10.0kb downstream 10000 false A09: 38614309-38624308 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362689 5261 Brassicaceae View MSA
123829527 5264 Brassicales-Malvales View MSA
124341698 5266 SBM View MSA
124249334 5268 Malvidae View MSA
124067543 5270 Rosid View MSA
123739750 5271 Pentapetalae View MSA
122789120 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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