Gene : Brara.E01751 B. rapa FPsc v1.3

Defline:  (1 of 52) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1751
Name:  ? Brara.E01751 Secondary Identifier:  ? PAC:30625050

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01751 0.5kb upstream 0.5kb upstream 2487 true A05: 12842161-12844647 Brassica rapa FPsc
Brara.E01751 0.5kb upstream 0.5kb upstream 500 false A05: 12842161-12842660 Brassica rapa FPsc
Brara.E01751 0.5kb downstream 0.5kb downstream 2487 true A05: 12842661-12845147 Brassica rapa FPsc
Brara.E01751 0.5kb downstream 0.5kb downstream 500 false A05: 12844648-12845147 Brassica rapa FPsc
Brara.E01751 1.0kb upstream 1.0kb upstream 2987 true A05: 12841661-12844647 Brassica rapa FPsc
Brara.E01751 1.0kb upstream 1.0kb upstream 1000 false A05: 12841661-12842660 Brassica rapa FPsc
Brara.E01751 1.0kb downstream 1.0kb downstream 2987 true A05: 12842661-12845647 Brassica rapa FPsc
Brara.E01751 1.0kb downstream 1.0kb downstream 1000 false A05: 12844648-12845647 Brassica rapa FPsc
Brara.E01751 2.0kb upstream 2.0kb upstream 3987 true A05: 12840661-12844647 Brassica rapa FPsc
Brara.E01751 2.0kb upstream 2.0kb upstream 2000 false A05: 12840661-12842660 Brassica rapa FPsc
Brara.E01751 2.0kb downstream 2.0kb downstream 3987 true A05: 12842661-12846647 Brassica rapa FPsc
Brara.E01751 2.0kb downstream 2.0kb downstream 2000 false A05: 12844648-12846647 Brassica rapa FPsc
Brara.E01751 5.0kb upstream 5.0kb upstream 6987 true A05: 12837661-12844647 Brassica rapa FPsc
Brara.E01751 5.0kb upstream 5.0kb upstream 5000 false A05: 12837661-12842660 Brassica rapa FPsc
Brara.E01751 5.0kb downstream 5.0kb downstream 6987 true A05: 12842661-12849647 Brassica rapa FPsc
Brara.E01751 5.0kb downstream 5.0kb downstream 5000 false A05: 12844648-12849647 Brassica rapa FPsc
Brara.E01751 10.0kb upstream 10.0kb upstream 11987 true A05: 12832661-12844647 Brassica rapa FPsc
Brara.E01751 10.0kb upstream 10.0kb upstream 10000 false A05: 12832661-12842660 Brassica rapa FPsc
Brara.E01751 10.0kb downstream 10.0kb downstream 11987 true A05: 12842661-12854647 Brassica rapa FPsc
Brara.E01751 10.0kb downstream 10.0kb downstream 10000 false A05: 12844648-12854647 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373705 5261 Brassicaceae View MSA
123833353 5264 Brassicales-Malvales View MSA
124338635 5266 SBM View MSA
124239171 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier