Gene : Brara.I04483 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 Genomic Order:  4483
Name:  ? Brara.I04483 Secondary Identifier:  ? PAC:30646243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04483 0.5kb upstream 0.5kb upstream 5194 true A09: 38860222-38865415 Brassica rapa FPsc
Brara.I04483 0.5kb upstream 0.5kb upstream 500 false A09: 38864916-38865415 Brassica rapa FPsc
Brara.I04483 0.5kb downstream 0.5kb downstream 5194 true A09: 38859722-38864915 Brassica rapa FPsc
Brara.I04483 0.5kb downstream 0.5kb downstream 500 false A09: 38859722-38860221 Brassica rapa FPsc
Brara.I04483 1.0kb upstream 1.0kb upstream 5694 true A09: 38860222-38865915 Brassica rapa FPsc
Brara.I04483 1.0kb upstream 1.0kb upstream 1000 false A09: 38864916-38865915 Brassica rapa FPsc
Brara.I04483 1.0kb downstream 1.0kb downstream 5694 true A09: 38859222-38864915 Brassica rapa FPsc
Brara.I04483 1.0kb downstream 1.0kb downstream 1000 false A09: 38859222-38860221 Brassica rapa FPsc
Brara.I04483 2.0kb upstream 2.0kb upstream 6694 true A09: 38860222-38866915 Brassica rapa FPsc
Brara.I04483 2.0kb upstream 2.0kb upstream 2000 false A09: 38864916-38866915 Brassica rapa FPsc
Brara.I04483 2.0kb downstream 2.0kb downstream 6694 true A09: 38858222-38864915 Brassica rapa FPsc
Brara.I04483 2.0kb downstream 2.0kb downstream 2000 false A09: 38858222-38860221 Brassica rapa FPsc
Brara.I04483 5.0kb upstream 5.0kb upstream 9694 true A09: 38860222-38869915 Brassica rapa FPsc
Brara.I04483 5.0kb upstream 5.0kb upstream 5000 false A09: 38864916-38869915 Brassica rapa FPsc
Brara.I04483 5.0kb downstream 5.0kb downstream 9694 true A09: 38855222-38864915 Brassica rapa FPsc
Brara.I04483 5.0kb downstream 5.0kb downstream 5000 false A09: 38855222-38860221 Brassica rapa FPsc
Brara.I04483 10.0kb upstream 10.0kb upstream 14694 true A09: 38860222-38874915 Brassica rapa FPsc
Brara.I04483 10.0kb upstream 10.0kb upstream 10000 false A09: 38864916-38874915 Brassica rapa FPsc
Brara.I04483 10.0kb downstream 10.0kb downstream 14694 true A09: 38850222-38864915 Brassica rapa FPsc
Brara.I04483 10.0kb downstream 10.0kb downstream 10000 false A09: 38850222-38860221 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354604 5261 Brassicaceae Singleton cluster - no MSA
123792976 5264 Brassicales-Malvales Singleton cluster - no MSA
124290834 5266 SBM Singleton cluster - no MSA
124255851 5268 Malvidae View MSA
124041454 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier