Gene : Brara.I04484 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 Genomic Order:  4484
Name:  ? Brara.I04484 Secondary Identifier:  ? PAC:30641606
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04484 0.5kb upstream 0.5kb upstream 6636 true A09: 38874848-38881483 Brassica rapa FPsc
Brara.I04484 0.5kb upstream 0.5kb upstream 500 false A09: 38880984-38881483 Brassica rapa FPsc
Brara.I04484 0.5kb downstream 0.5kb downstream 6636 true A09: 38874348-38880983 Brassica rapa FPsc
Brara.I04484 0.5kb downstream 0.5kb downstream 500 false A09: 38874348-38874847 Brassica rapa FPsc
Brara.I04484 1.0kb upstream 1.0kb upstream 7136 true A09: 38874848-38881983 Brassica rapa FPsc
Brara.I04484 1.0kb upstream 1.0kb upstream 1000 false A09: 38880984-38881983 Brassica rapa FPsc
Brara.I04484 1.0kb downstream 1.0kb downstream 7136 true A09: 38873848-38880983 Brassica rapa FPsc
Brara.I04484 1.0kb downstream 1.0kb downstream 1000 false A09: 38873848-38874847 Brassica rapa FPsc
Brara.I04484 2.0kb upstream 2.0kb upstream 8136 true A09: 38874848-38882983 Brassica rapa FPsc
Brara.I04484 2.0kb upstream 2.0kb upstream 2000 false A09: 38880984-38882983 Brassica rapa FPsc
Brara.I04484 2.0kb downstream 2.0kb downstream 8136 true A09: 38872848-38880983 Brassica rapa FPsc
Brara.I04484 2.0kb downstream 2.0kb downstream 2000 false A09: 38872848-38874847 Brassica rapa FPsc
Brara.I04484 5.0kb upstream 5.0kb upstream 11136 true A09: 38874848-38885983 Brassica rapa FPsc
Brara.I04484 5.0kb upstream 5.0kb upstream 5000 false A09: 38880984-38885983 Brassica rapa FPsc
Brara.I04484 5.0kb downstream 5.0kb downstream 11136 true A09: 38869848-38880983 Brassica rapa FPsc
Brara.I04484 5.0kb downstream 5.0kb downstream 5000 false A09: 38869848-38874847 Brassica rapa FPsc
Brara.I04484 10.0kb upstream 10.0kb upstream 16136 true A09: 38874848-38890983 Brassica rapa FPsc
Brara.I04484 10.0kb upstream 10.0kb upstream 10000 false A09: 38880984-38890983 Brassica rapa FPsc
Brara.I04484 10.0kb downstream 10.0kb downstream 16136 true A09: 38864848-38880983 Brassica rapa FPsc
Brara.I04484 10.0kb downstream 10.0kb downstream 10000 false A09: 38864848-38874847 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353458 5261 Brassicaceae Singleton cluster - no MSA
123842233 5264 Brassicales-Malvales View MSA
124323338 5266 SBM View MSA
124255360 5268 Malvidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier