Gene : Brara.I04482 B. rapa FPsc v1.3
Defline:  (1 of 2) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  4482
Name:  ? Brara.I04482 Secondary Identifier:  ? PAC:30641945
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2541 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04482 0.5kb upstream 0.5kb upstream 3358 true A09: 38854513-38857870 Brassica rapa FPsc
Brara.I04482 0.5kb upstream 0.5kb upstream 500 false A09: 38857371-38857870 Brassica rapa FPsc
Brara.I04482 0.5kb downstream 0.5kb downstream 3358 true A09: 38854013-38857370 Brassica rapa FPsc
Brara.I04482 0.5kb downstream 0.5kb downstream 500 false A09: 38854013-38854512 Brassica rapa FPsc
Brara.I04482 1.0kb upstream 1.0kb upstream 3858 true A09: 38854513-38858370 Brassica rapa FPsc
Brara.I04482 1.0kb upstream 1.0kb upstream 1000 false A09: 38857371-38858370 Brassica rapa FPsc
Brara.I04482 1.0kb downstream 1.0kb downstream 3858 true A09: 38853513-38857370 Brassica rapa FPsc
Brara.I04482 1.0kb downstream 1.0kb downstream 1000 false A09: 38853513-38854512 Brassica rapa FPsc
Brara.I04482 2.0kb upstream 2.0kb upstream 4858 true A09: 38854513-38859370 Brassica rapa FPsc
Brara.I04482 2.0kb upstream 2.0kb upstream 2000 false A09: 38857371-38859370 Brassica rapa FPsc
Brara.I04482 2.0kb downstream 2.0kb downstream 4858 true A09: 38852513-38857370 Brassica rapa FPsc
Brara.I04482 2.0kb downstream 2.0kb downstream 2000 false A09: 38852513-38854512 Brassica rapa FPsc
Brara.I04482 5.0kb upstream 5.0kb upstream 7858 true A09: 38854513-38862370 Brassica rapa FPsc
Brara.I04482 5.0kb upstream 5.0kb upstream 5000 false A09: 38857371-38862370 Brassica rapa FPsc
Brara.I04482 5.0kb downstream 5.0kb downstream 7858 true A09: 38849513-38857370 Brassica rapa FPsc
Brara.I04482 5.0kb downstream 5.0kb downstream 5000 false A09: 38849513-38854512 Brassica rapa FPsc
Brara.I04482 10.0kb upstream 10.0kb upstream 12858 true A09: 38854513-38867370 Brassica rapa FPsc
Brara.I04482 10.0kb upstream 10.0kb upstream 10000 false A09: 38857371-38867370 Brassica rapa FPsc
Brara.I04482 10.0kb downstream 10.0kb downstream 12858 true A09: 38844513-38857370 Brassica rapa FPsc
Brara.I04482 10.0kb downstream 10.0kb downstream 10000 false A09: 38844513-38854512 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353542 5261 Brassicaceae Singleton cluster - no MSA
123840142 5264 Brassicales-Malvales View MSA
124336797 5266 SBM View MSA
124240499 5268 Malvidae View MSA
124063919 5270 Rosid View MSA
123740858 5271 Pentapetalae View MSA
122788085 5272 Eudicot View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier