Gene : Brara.I04283 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10509:SF27 - PROTEIN COMT-1 Genomic Order:  4283
Name:  ? Brara.I04283 Secondary Identifier:  ? PAC:30643531
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-361 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04283 0.5kb upstream 0.5kb upstream 2539 true A09: 37845176-37847714 Brassica rapa FPsc
Brara.I04283 0.5kb upstream 0.5kb upstream 500 false A09: 37847215-37847714 Brassica rapa FPsc
Brara.I04283 0.5kb downstream 0.5kb downstream 2539 true A09: 37844676-37847214 Brassica rapa FPsc
Brara.I04283 0.5kb downstream 0.5kb downstream 500 false A09: 37844676-37845175 Brassica rapa FPsc
Brara.I04283 1.0kb upstream 1.0kb upstream 3039 true A09: 37845176-37848214 Brassica rapa FPsc
Brara.I04283 1.0kb upstream 1.0kb upstream 1000 false A09: 37847215-37848214 Brassica rapa FPsc
Brara.I04283 1.0kb downstream 1.0kb downstream 3039 true A09: 37844176-37847214 Brassica rapa FPsc
Brara.I04283 1.0kb downstream 1.0kb downstream 1000 false A09: 37844176-37845175 Brassica rapa FPsc
Brara.I04283 2.0kb upstream 2.0kb upstream 4039 true A09: 37845176-37849214 Brassica rapa FPsc
Brara.I04283 2.0kb upstream 2.0kb upstream 2000 false A09: 37847215-37849214 Brassica rapa FPsc
Brara.I04283 2.0kb downstream 2.0kb downstream 4039 true A09: 37843176-37847214 Brassica rapa FPsc
Brara.I04283 2.0kb downstream 2.0kb downstream 2000 false A09: 37843176-37845175 Brassica rapa FPsc
Brara.I04283 5.0kb upstream 5.0kb upstream 7039 true A09: 37845176-37852214 Brassica rapa FPsc
Brara.I04283 5.0kb upstream 5.0kb upstream 5000 false A09: 37847215-37852214 Brassica rapa FPsc
Brara.I04283 5.0kb downstream 5.0kb downstream 7039 true A09: 37840176-37847214 Brassica rapa FPsc
Brara.I04283 5.0kb downstream 5.0kb downstream 5000 false A09: 37840176-37845175 Brassica rapa FPsc
Brara.I04283 10.0kb upstream 10.0kb upstream 12039 true A09: 37845176-37857214 Brassica rapa FPsc
Brara.I04283 10.0kb upstream 10.0kb upstream 10000 false A09: 37847215-37857214 Brassica rapa FPsc
Brara.I04283 10.0kb downstream 10.0kb downstream 12039 true A09: 37835176-37847214 Brassica rapa FPsc
Brara.I04283 10.0kb downstream 10.0kb downstream 10000 false A09: 37835176-37845175 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375344 5261 Brassicaceae View MSA
123837032 5264 Brassicales-Malvales View MSA
124341232 5266 SBM View MSA
124240471 5268 Malvidae View MSA
124062040 5270 Rosid View MSA
123738490 5271 Pentapetalae View MSA
122794453 5272 Eudicot View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier