Gene : Brara.C01007 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Genomic Order:  1007
Name:  ? Brara.C01007 Secondary Identifier:  ? PAC:30616777
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01007 0.5kb upstream 0.5kb upstream 2018 true A03: 4746361-4748378 Brassica rapa FPsc
Brara.C01007 0.5kb upstream 0.5kb upstream 500 false A03: 4746361-4746860 Brassica rapa FPsc
Brara.C01007 0.5kb downstream 0.5kb downstream 2018 true A03: 4746861-4748878 Brassica rapa FPsc
Brara.C01007 0.5kb downstream 0.5kb downstream 500 false A03: 4748379-4748878 Brassica rapa FPsc
Brara.C01007 1.0kb upstream 1.0kb upstream 2518 true A03: 4745861-4748378 Brassica rapa FPsc
Brara.C01007 1.0kb upstream 1.0kb upstream 1000 false A03: 4745861-4746860 Brassica rapa FPsc
Brara.C01007 1.0kb downstream 1.0kb downstream 2518 true A03: 4746861-4749378 Brassica rapa FPsc
Brara.C01007 1.0kb downstream 1.0kb downstream 1000 false A03: 4748379-4749378 Brassica rapa FPsc
Brara.C01007 2.0kb upstream 2.0kb upstream 3518 true A03: 4744861-4748378 Brassica rapa FPsc
Brara.C01007 2.0kb upstream 2.0kb upstream 2000 false A03: 4744861-4746860 Brassica rapa FPsc
Brara.C01007 2.0kb downstream 2.0kb downstream 3518 true A03: 4746861-4750378 Brassica rapa FPsc
Brara.C01007 2.0kb downstream 2.0kb downstream 2000 false A03: 4748379-4750378 Brassica rapa FPsc
Brara.C01007 5.0kb upstream 5.0kb upstream 6518 true A03: 4741861-4748378 Brassica rapa FPsc
Brara.C01007 5.0kb upstream 5.0kb upstream 5000 false A03: 4741861-4746860 Brassica rapa FPsc
Brara.C01007 5.0kb downstream 5.0kb downstream 6518 true A03: 4746861-4753378 Brassica rapa FPsc
Brara.C01007 5.0kb downstream 5.0kb downstream 5000 false A03: 4748379-4753378 Brassica rapa FPsc
Brara.C01007 10.0kb upstream 10.0kb upstream 11518 true A03: 4736861-4748378 Brassica rapa FPsc
Brara.C01007 10.0kb upstream 10.0kb upstream 10000 false A03: 4736861-4746860 Brassica rapa FPsc
Brara.C01007 10.0kb downstream 10.0kb downstream 11518 true A03: 4746861-4758378 Brassica rapa FPsc
Brara.C01007 10.0kb downstream 10.0kb downstream 10000 false A03: 4748379-4758378 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382314 5261 Brassicaceae View MSA
123803823 5264 Brassicales-Malvales View MSA
124300891 5266 SBM View MSA
124252646 5268 Malvidae View MSA
124068201 5270 Rosid View MSA
123749750 5271 Pentapetalae View MSA
122797243 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier