Gene : Brara.I04166 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12838 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 Genomic Order:  4166
Name:  ? Brara.I04166 Secondary Identifier:  ? PAC:30643675
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04166 0.5kb upstream 0.5kb upstream 2178 true A09: 37203003-37205180 Brassica rapa FPsc
Brara.I04166 0.5kb upstream 0.5kb upstream 500 false A09: 37204681-37205180 Brassica rapa FPsc
Brara.I04166 0.5kb downstream 0.5kb downstream 2178 true A09: 37202503-37204680 Brassica rapa FPsc
Brara.I04166 0.5kb downstream 0.5kb downstream 500 false A09: 37202503-37203002 Brassica rapa FPsc
Brara.I04166 1.0kb upstream 1.0kb upstream 2678 true A09: 37203003-37205680 Brassica rapa FPsc
Brara.I04166 1.0kb upstream 1.0kb upstream 1000 false A09: 37204681-37205680 Brassica rapa FPsc
Brara.I04166 1.0kb downstream 1.0kb downstream 2678 true A09: 37202003-37204680 Brassica rapa FPsc
Brara.I04166 1.0kb downstream 1.0kb downstream 1000 false A09: 37202003-37203002 Brassica rapa FPsc
Brara.I04166 2.0kb upstream 2.0kb upstream 3678 true A09: 37203003-37206680 Brassica rapa FPsc
Brara.I04166 2.0kb upstream 2.0kb upstream 2000 false A09: 37204681-37206680 Brassica rapa FPsc
Brara.I04166 2.0kb downstream 2.0kb downstream 3678 true A09: 37201003-37204680 Brassica rapa FPsc
Brara.I04166 2.0kb downstream 2.0kb downstream 2000 false A09: 37201003-37203002 Brassica rapa FPsc
Brara.I04166 5.0kb upstream 5.0kb upstream 6678 true A09: 37203003-37209680 Brassica rapa FPsc
Brara.I04166 5.0kb upstream 5.0kb upstream 5000 false A09: 37204681-37209680 Brassica rapa FPsc
Brara.I04166 5.0kb downstream 5.0kb downstream 6678 true A09: 37198003-37204680 Brassica rapa FPsc
Brara.I04166 5.0kb downstream 5.0kb downstream 5000 false A09: 37198003-37203002 Brassica rapa FPsc
Brara.I04166 10.0kb upstream 10.0kb upstream 11678 true A09: 37203003-37214680 Brassica rapa FPsc
Brara.I04166 10.0kb upstream 10.0kb upstream 10000 false A09: 37204681-37214680 Brassica rapa FPsc
Brara.I04166 10.0kb downstream 10.0kb downstream 11678 true A09: 37193003-37204680 Brassica rapa FPsc
Brara.I04166 10.0kb downstream 10.0kb downstream 10000 false A09: 37193003-37203002 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026243 5273 Angiosperm View MSA
122363228 5261 Brassicaceae View MSA
123831871 5264 Brassicales-Malvales View MSA
124337159 5266 SBM View MSA
124241543 5268 Malvidae View MSA
124062560 5270 Rosid View MSA
123737231 5271 Pentapetalae View MSA
122787180 5272 Eudicot View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier