Gene : Brara.E01703 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR24096:SF134 - LONG CHAIN ACYL-COA SYNTHETASE 2 Genomic Order:  1703
Name:  ? Brara.E01703 Secondary Identifier:  ? PAC:30623439
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5143 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5885 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6803 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01703 0.5kb upstream 0.5kb upstream 5404 true A05: 12143503-12148906 Brassica rapa FPsc
Brara.E01703 0.5kb upstream 0.5kb upstream 500 false A05: 12148407-12148906 Brassica rapa FPsc
Brara.E01703 0.5kb downstream 0.5kb downstream 5404 true A05: 12143003-12148406 Brassica rapa FPsc
Brara.E01703 0.5kb downstream 0.5kb downstream 500 false A05: 12143003-12143502 Brassica rapa FPsc
Brara.E01703 1.0kb upstream 1.0kb upstream 5904 true A05: 12143503-12149406 Brassica rapa FPsc
Brara.E01703 1.0kb upstream 1.0kb upstream 1000 false A05: 12148407-12149406 Brassica rapa FPsc
Brara.E01703 1.0kb downstream 1.0kb downstream 5904 true A05: 12142503-12148406 Brassica rapa FPsc
Brara.E01703 1.0kb downstream 1.0kb downstream 1000 false A05: 12142503-12143502 Brassica rapa FPsc
Brara.E01703 2.0kb upstream 2.0kb upstream 6904 true A05: 12143503-12150406 Brassica rapa FPsc
Brara.E01703 2.0kb upstream 2.0kb upstream 2000 false A05: 12148407-12150406 Brassica rapa FPsc
Brara.E01703 2.0kb downstream 2.0kb downstream 6904 true A05: 12141503-12148406 Brassica rapa FPsc
Brara.E01703 2.0kb downstream 2.0kb downstream 2000 false A05: 12141503-12143502 Brassica rapa FPsc
Brara.E01703 5.0kb upstream 5.0kb upstream 9904 true A05: 12143503-12153406 Brassica rapa FPsc
Brara.E01703 5.0kb upstream 5.0kb upstream 5000 false A05: 12148407-12153406 Brassica rapa FPsc
Brara.E01703 5.0kb downstream 5.0kb downstream 9904 true A05: 12138503-12148406 Brassica rapa FPsc
Brara.E01703 5.0kb downstream 5.0kb downstream 5000 false A05: 12138503-12143502 Brassica rapa FPsc
Brara.E01703 10.0kb upstream 10.0kb upstream 14904 true A05: 12143503-12158406 Brassica rapa FPsc
Brara.E01703 10.0kb upstream 10.0kb upstream 10000 false A05: 12148407-12158406 Brassica rapa FPsc
Brara.E01703 10.0kb downstream 10.0kb downstream 14904 true A05: 12133503-12148406 Brassica rapa FPsc
Brara.E01703 10.0kb downstream 10.0kb downstream 10000 false A05: 12133503-12143502 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370491 5261 Brassicaceae View MSA
123830194 5264 Brassicales-Malvales View MSA
124339284 5266 SBM View MSA
124245132 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier