Gene : Brara.I04242 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Genomic Order:  4242
Name:  ? Brara.I04242 Secondary Identifier:  ? PAC:30644176
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ETHYL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04242 0.5kb upstream 0.5kb upstream 2715 true A09: 37611994-37614708 Brassica rapa FPsc
Brara.I04242 0.5kb upstream 0.5kb upstream 500 false A09: 37614209-37614708 Brassica rapa FPsc
Brara.I04242 0.5kb downstream 0.5kb downstream 2715 true A09: 37611494-37614208 Brassica rapa FPsc
Brara.I04242 0.5kb downstream 0.5kb downstream 500 false A09: 37611494-37611993 Brassica rapa FPsc
Brara.I04242 1.0kb upstream 1.0kb upstream 3215 true A09: 37611994-37615208 Brassica rapa FPsc
Brara.I04242 1.0kb upstream 1.0kb upstream 1000 false A09: 37614209-37615208 Brassica rapa FPsc
Brara.I04242 1.0kb downstream 1.0kb downstream 3215 true A09: 37610994-37614208 Brassica rapa FPsc
Brara.I04242 1.0kb downstream 1.0kb downstream 1000 false A09: 37610994-37611993 Brassica rapa FPsc
Brara.I04242 2.0kb upstream 2.0kb upstream 4215 true A09: 37611994-37616208 Brassica rapa FPsc
Brara.I04242 2.0kb upstream 2.0kb upstream 2000 false A09: 37614209-37616208 Brassica rapa FPsc
Brara.I04242 2.0kb downstream 2.0kb downstream 4215 true A09: 37609994-37614208 Brassica rapa FPsc
Brara.I04242 2.0kb downstream 2.0kb downstream 2000 false A09: 37609994-37611993 Brassica rapa FPsc
Brara.I04242 5.0kb upstream 5.0kb upstream 7215 true A09: 37611994-37619208 Brassica rapa FPsc
Brara.I04242 5.0kb upstream 5.0kb upstream 5000 false A09: 37614209-37619208 Brassica rapa FPsc
Brara.I04242 5.0kb downstream 5.0kb downstream 7215 true A09: 37606994-37614208 Brassica rapa FPsc
Brara.I04242 5.0kb downstream 5.0kb downstream 5000 false A09: 37606994-37611993 Brassica rapa FPsc
Brara.I04242 10.0kb upstream 10.0kb upstream 12215 true A09: 37611994-37624208 Brassica rapa FPsc
Brara.I04242 10.0kb upstream 10.0kb upstream 10000 false A09: 37614209-37624208 Brassica rapa FPsc
Brara.I04242 10.0kb downstream 10.0kb downstream 12215 true A09: 37601994-37614208 Brassica rapa FPsc
Brara.I04242 10.0kb downstream 10.0kb downstream 10000 false A09: 37601994-37611993 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362081 5261 Brassicaceae View MSA
123841414 5264 Brassicales-Malvales View MSA
124344234 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier