Gene : Brara.E01720 B. rapa FPsc v1.3
Defline:  (1 of 6) 1.10.3.11 - Ubiquinol oxidase (non-electrogenic) / Ubiquinol oxidase Genomic Order:  1720
Name:  ? Brara.E01720 Secondary Identifier:  ? PAC:30627187
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01720 0.5kb upstream 0.5kb upstream 2470 true A05: 12449704-12452173 Brassica rapa FPsc
Brara.E01720 0.5kb upstream 0.5kb upstream 500 false A05: 12451674-12452173 Brassica rapa FPsc
Brara.E01720 0.5kb downstream 0.5kb downstream 2470 true A05: 12449204-12451673 Brassica rapa FPsc
Brara.E01720 0.5kb downstream 0.5kb downstream 500 false A05: 12449204-12449703 Brassica rapa FPsc
Brara.E01720 1.0kb upstream 1.0kb upstream 2970 true A05: 12449704-12452673 Brassica rapa FPsc
Brara.E01720 1.0kb upstream 1.0kb upstream 1000 false A05: 12451674-12452673 Brassica rapa FPsc
Brara.E01720 1.0kb downstream 1.0kb downstream 2970 true A05: 12448704-12451673 Brassica rapa FPsc
Brara.E01720 1.0kb downstream 1.0kb downstream 1000 false A05: 12448704-12449703 Brassica rapa FPsc
Brara.E01720 2.0kb upstream 2.0kb upstream 3970 true A05: 12449704-12453673 Brassica rapa FPsc
Brara.E01720 2.0kb upstream 2.0kb upstream 2000 false A05: 12451674-12453673 Brassica rapa FPsc
Brara.E01720 2.0kb downstream 2.0kb downstream 3970 true A05: 12447704-12451673 Brassica rapa FPsc
Brara.E01720 2.0kb downstream 2.0kb downstream 2000 false A05: 12447704-12449703 Brassica rapa FPsc
Brara.E01720 5.0kb upstream 5.0kb upstream 6970 true A05: 12449704-12456673 Brassica rapa FPsc
Brara.E01720 5.0kb upstream 5.0kb upstream 5000 false A05: 12451674-12456673 Brassica rapa FPsc
Brara.E01720 5.0kb downstream 5.0kb downstream 6970 true A05: 12444704-12451673 Brassica rapa FPsc
Brara.E01720 5.0kb downstream 5.0kb downstream 5000 false A05: 12444704-12449703 Brassica rapa FPsc
Brara.E01720 10.0kb upstream 10.0kb upstream 11970 true A05: 12449704-12461673 Brassica rapa FPsc
Brara.E01720 10.0kb upstream 10.0kb upstream 10000 false A05: 12451674-12461673 Brassica rapa FPsc
Brara.E01720 10.0kb downstream 10.0kb downstream 11970 true A05: 12439704-12451673 Brassica rapa FPsc
Brara.E01720 10.0kb downstream 10.0kb downstream 10000 false A05: 12439704-12449703 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360781 5261 Brassicaceae View MSA
123828425 5264 Brassicales-Malvales View MSA
124343478 5266 SBM View MSA
124246674 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier