Gene : Brara.I03971 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase Genomic Order:  3971
Name:  ? Brara.I03971 Secondary Identifier:  ? PAC:30641481
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5337 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03971 0.5kb upstream 0.5kb upstream 5322 true A09: 36063887-36069208 Brassica rapa FPsc
Brara.I03971 0.5kb upstream 0.5kb upstream 500 false A09: 36068709-36069208 Brassica rapa FPsc
Brara.I03971 0.5kb downstream 0.5kb downstream 5322 true A09: 36063387-36068708 Brassica rapa FPsc
Brara.I03971 0.5kb downstream 0.5kb downstream 500 false A09: 36063387-36063886 Brassica rapa FPsc
Brara.I03971 1.0kb upstream 1.0kb upstream 5822 true A09: 36063887-36069708 Brassica rapa FPsc
Brara.I03971 1.0kb upstream 1.0kb upstream 1000 false A09: 36068709-36069708 Brassica rapa FPsc
Brara.I03971 1.0kb downstream 1.0kb downstream 5822 true A09: 36062887-36068708 Brassica rapa FPsc
Brara.I03971 1.0kb downstream 1.0kb downstream 1000 false A09: 36062887-36063886 Brassica rapa FPsc
Brara.I03971 2.0kb upstream 2.0kb upstream 6822 true A09: 36063887-36070708 Brassica rapa FPsc
Brara.I03971 2.0kb upstream 2.0kb upstream 2000 false A09: 36068709-36070708 Brassica rapa FPsc
Brara.I03971 2.0kb downstream 2.0kb downstream 6822 true A09: 36061887-36068708 Brassica rapa FPsc
Brara.I03971 2.0kb downstream 2.0kb downstream 2000 false A09: 36061887-36063886 Brassica rapa FPsc
Brara.I03971 5.0kb upstream 5.0kb upstream 9822 true A09: 36063887-36073708 Brassica rapa FPsc
Brara.I03971 5.0kb upstream 5.0kb upstream 5000 false A09: 36068709-36073708 Brassica rapa FPsc
Brara.I03971 5.0kb downstream 5.0kb downstream 9822 true A09: 36058887-36068708 Brassica rapa FPsc
Brara.I03971 5.0kb downstream 5.0kb downstream 5000 false A09: 36058887-36063886 Brassica rapa FPsc
Brara.I03971 10.0kb upstream 10.0kb upstream 14822 true A09: 36063887-36078708 Brassica rapa FPsc
Brara.I03971 10.0kb upstream 10.0kb upstream 10000 false A09: 36068709-36078708 Brassica rapa FPsc
Brara.I03971 10.0kb downstream 10.0kb downstream 14822 true A09: 36053887-36068708 Brassica rapa FPsc
Brara.I03971 10.0kb downstream 10.0kb downstream 10000 false A09: 36053887-36063886 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372052 5261 Brassicaceae View MSA
123831242 5264 Brassicales-Malvales View MSA
124344017 5266 SBM View MSA
124249240 5268 Malvidae View MSA
124064190 5270 Rosid View MSA
123740319 5271 Pentapetalae View MSA
122793686 5272 Eudicot View MSA
122044208 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121345613 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier