Gene : Brara.B03997 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Genomic Order:  3997
Name:  ? Brara.B03997 Secondary Identifier:  ? PAC:30608745
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03997 0.5kb upstream 0.5kb upstream 2118 true A02: 32671240-32673357 Brassica rapa FPsc
Brara.B03997 0.5kb upstream 0.5kb upstream 500 false A02: 32671240-32671739 Brassica rapa FPsc
Brara.B03997 0.5kb downstream 0.5kb downstream 2118 true A02: 32671740-32673857 Brassica rapa FPsc
Brara.B03997 0.5kb downstream 0.5kb downstream 500 false A02: 32673358-32673857 Brassica rapa FPsc
Brara.B03997 1.0kb upstream 1.0kb upstream 2618 true A02: 32670740-32673357 Brassica rapa FPsc
Brara.B03997 1.0kb upstream 1.0kb upstream 1000 false A02: 32670740-32671739 Brassica rapa FPsc
Brara.B03997 1.0kb downstream 1.0kb downstream 2618 true A02: 32671740-32674357 Brassica rapa FPsc
Brara.B03997 1.0kb downstream 1.0kb downstream 1000 false A02: 32673358-32674357 Brassica rapa FPsc
Brara.B03997 2.0kb upstream 2.0kb upstream 3618 true A02: 32669740-32673357 Brassica rapa FPsc
Brara.B03997 2.0kb upstream 2.0kb upstream 2000 false A02: 32669740-32671739 Brassica rapa FPsc
Brara.B03997 2.0kb downstream 2.0kb downstream 3618 true A02: 32671740-32675357 Brassica rapa FPsc
Brara.B03997 2.0kb downstream 2.0kb downstream 2000 false A02: 32673358-32675357 Brassica rapa FPsc
Brara.B03997 5.0kb upstream 5.0kb upstream 6618 true A02: 32666740-32673357 Brassica rapa FPsc
Brara.B03997 5.0kb upstream 5.0kb upstream 5000 false A02: 32666740-32671739 Brassica rapa FPsc
Brara.B03997 5.0kb downstream 5.0kb downstream 6618 true A02: 32671740-32678357 Brassica rapa FPsc
Brara.B03997 5.0kb downstream 5.0kb downstream 5000 false A02: 32673358-32678357 Brassica rapa FPsc
Brara.B03997 10.0kb upstream 10.0kb upstream 11618 true A02: 32661740-32673357 Brassica rapa FPsc
Brara.B03997 10.0kb upstream 10.0kb upstream 10000 false A02: 32661740-32671739 Brassica rapa FPsc
Brara.B03997 10.0kb downstream 10.0kb downstream 11618 true A02: 32671740-32683357 Brassica rapa FPsc
Brara.B03997 10.0kb downstream 10.0kb downstream 10000 false A02: 32673358-32683357 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364406 5261 Brassicaceae View MSA
123840363 5264 Brassicales-Malvales View MSA
124341777 5266 SBM View MSA
124237212 5268 Malvidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier