Gene : Brara.B03988 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR22807:SF16 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  3988
Name:  ? Brara.B03988 Secondary Identifier:  ? PAC:30610681
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6829 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03988 0.5kb upstream 0.5kb upstream 2809 true A02: 32646187-32648995 Brassica rapa FPsc
Brara.B03988 0.5kb upstream 0.5kb upstream 500 false A02: 32646187-32646686 Brassica rapa FPsc
Brara.B03988 0.5kb downstream 0.5kb downstream 2809 true A02: 32646687-32649495 Brassica rapa FPsc
Brara.B03988 0.5kb downstream 0.5kb downstream 500 false A02: 32648996-32649495 Brassica rapa FPsc
Brara.B03988 1.0kb upstream 1.0kb upstream 3309 true A02: 32645687-32648995 Brassica rapa FPsc
Brara.B03988 1.0kb upstream 1.0kb upstream 1000 false A02: 32645687-32646686 Brassica rapa FPsc
Brara.B03988 1.0kb downstream 1.0kb downstream 3309 true A02: 32646687-32649995 Brassica rapa FPsc
Brara.B03988 1.0kb downstream 1.0kb downstream 1000 false A02: 32648996-32649995 Brassica rapa FPsc
Brara.B03988 2.0kb upstream 2.0kb upstream 4309 true A02: 32644687-32648995 Brassica rapa FPsc
Brara.B03988 2.0kb upstream 2.0kb upstream 2000 false A02: 32644687-32646686 Brassica rapa FPsc
Brara.B03988 2.0kb downstream 2.0kb downstream 4309 true A02: 32646687-32650995 Brassica rapa FPsc
Brara.B03988 2.0kb downstream 2.0kb downstream 2000 false A02: 32648996-32650995 Brassica rapa FPsc
Brara.B03988 5.0kb upstream 5.0kb upstream 7309 true A02: 32641687-32648995 Brassica rapa FPsc
Brara.B03988 5.0kb upstream 5.0kb upstream 5000 false A02: 32641687-32646686 Brassica rapa FPsc
Brara.B03988 5.0kb downstream 5.0kb downstream 7309 true A02: 32646687-32653995 Brassica rapa FPsc
Brara.B03988 5.0kb downstream 5.0kb downstream 5000 false A02: 32648996-32653995 Brassica rapa FPsc
Brara.B03988 10.0kb upstream 10.0kb upstream 12309 true A02: 32636687-32648995 Brassica rapa FPsc
Brara.B03988 10.0kb upstream 10.0kb upstream 10000 false A02: 32636687-32646686 Brassica rapa FPsc
Brara.B03988 10.0kb downstream 10.0kb downstream 12309 true A02: 32646687-32658995 Brassica rapa FPsc
Brara.B03988 10.0kb downstream 10.0kb downstream 10000 false A02: 32648996-32658995 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369256 5261 Brassicaceae View MSA
123833659 5264 Brassicales-Malvales View MSA
124342565 5266 SBM View MSA
124239700 5268 Malvidae View MSA
124050429 5270 Rosid View MSA
123737696 5271 Pentapetalae View MSA
122785944 5272 Eudicot View MSA
122044592 5273 Angiosperm View MSA
121346334 5274 Embryophyte View MSA
123425870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier