Gene : Brara.I03876 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11404:SF6 - SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  3876
Name:  ? Brara.I03876 Secondary Identifier:  ? PAC:30644279
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6854 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03876 0.5kb upstream 0.5kb upstream 1790 true A09: 35495036-35496825 Brassica rapa FPsc
Brara.I03876 0.5kb upstream 0.5kb upstream 500 false A09: 35496326-35496825 Brassica rapa FPsc
Brara.I03876 0.5kb downstream 0.5kb downstream 1790 true A09: 35494536-35496325 Brassica rapa FPsc
Brara.I03876 0.5kb downstream 0.5kb downstream 500 false A09: 35494536-35495035 Brassica rapa FPsc
Brara.I03876 1.0kb upstream 1.0kb upstream 2290 true A09: 35495036-35497325 Brassica rapa FPsc
Brara.I03876 1.0kb upstream 1.0kb upstream 1000 false A09: 35496326-35497325 Brassica rapa FPsc
Brara.I03876 1.0kb downstream 1.0kb downstream 2290 true A09: 35494036-35496325 Brassica rapa FPsc
Brara.I03876 1.0kb downstream 1.0kb downstream 1000 false A09: 35494036-35495035 Brassica rapa FPsc
Brara.I03876 2.0kb upstream 2.0kb upstream 3290 true A09: 35495036-35498325 Brassica rapa FPsc
Brara.I03876 2.0kb upstream 2.0kb upstream 2000 false A09: 35496326-35498325 Brassica rapa FPsc
Brara.I03876 2.0kb downstream 2.0kb downstream 3290 true A09: 35493036-35496325 Brassica rapa FPsc
Brara.I03876 2.0kb downstream 2.0kb downstream 2000 false A09: 35493036-35495035 Brassica rapa FPsc
Brara.I03876 5.0kb upstream 5.0kb upstream 6290 true A09: 35495036-35501325 Brassica rapa FPsc
Brara.I03876 5.0kb upstream 5.0kb upstream 5000 false A09: 35496326-35501325 Brassica rapa FPsc
Brara.I03876 5.0kb downstream 5.0kb downstream 6290 true A09: 35490036-35496325 Brassica rapa FPsc
Brara.I03876 5.0kb downstream 5.0kb downstream 5000 false A09: 35490036-35495035 Brassica rapa FPsc
Brara.I03876 10.0kb upstream 10.0kb upstream 11290 true A09: 35495036-35506325 Brassica rapa FPsc
Brara.I03876 10.0kb upstream 10.0kb upstream 10000 false A09: 35496326-35506325 Brassica rapa FPsc
Brara.I03876 10.0kb downstream 10.0kb downstream 11290 true A09: 35485036-35496325 Brassica rapa FPsc
Brara.I03876 10.0kb downstream 10.0kb downstream 10000 false A09: 35485036-35495035 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510302 5273 Angiosperm View MSA
122361724 5261 Brassicaceae View MSA
123798231 5264 Brassicales-Malvales View MSA
124295900 5266 SBM View MSA
124148209 5268 Malvidae View MSA
123874253 5270 Rosid View MSA
123458256 5271 Pentapetalae View MSA
122493663 5272 Eudicot View MSA
120783407 5274 Embryophyte View MSA
122825421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier