Gene : Brara.C00470 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23406:SF31 - NADP-DEPENDENT MALIC ENZYME 2-RELATED Genomic Order:  470
Name:  ? Brara.C00470 Secondary Identifier:  ? PAC:30619138
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00470 0.5kb upstream 0.5kb upstream 4359 true A03: 2232278-2236636 Brassica rapa FPsc
Brara.C00470 0.5kb upstream 0.5kb upstream 500 false A03: 2232278-2232777 Brassica rapa FPsc
Brara.C00470 0.5kb downstream 0.5kb downstream 4359 true A03: 2232778-2237136 Brassica rapa FPsc
Brara.C00470 0.5kb downstream 0.5kb downstream 500 false A03: 2236637-2237136 Brassica rapa FPsc
Brara.C00470 1.0kb upstream 1.0kb upstream 4859 true A03: 2231778-2236636 Brassica rapa FPsc
Brara.C00470 1.0kb upstream 1.0kb upstream 1000 false A03: 2231778-2232777 Brassica rapa FPsc
Brara.C00470 1.0kb downstream 1.0kb downstream 4859 true A03: 2232778-2237636 Brassica rapa FPsc
Brara.C00470 1.0kb downstream 1.0kb downstream 1000 false A03: 2236637-2237636 Brassica rapa FPsc
Brara.C00470 2.0kb upstream 2.0kb upstream 5859 true A03: 2230778-2236636 Brassica rapa FPsc
Brara.C00470 2.0kb upstream 2.0kb upstream 2000 false A03: 2230778-2232777 Brassica rapa FPsc
Brara.C00470 2.0kb downstream 2.0kb downstream 5859 true A03: 2232778-2238636 Brassica rapa FPsc
Brara.C00470 2.0kb downstream 2.0kb downstream 2000 false A03: 2236637-2238636 Brassica rapa FPsc
Brara.C00470 5.0kb upstream 5.0kb upstream 8859 true A03: 2227778-2236636 Brassica rapa FPsc
Brara.C00470 5.0kb upstream 5.0kb upstream 5000 false A03: 2227778-2232777 Brassica rapa FPsc
Brara.C00470 5.0kb downstream 5.0kb downstream 8859 true A03: 2232778-2241636 Brassica rapa FPsc
Brara.C00470 5.0kb downstream 5.0kb downstream 5000 false A03: 2236637-2241636 Brassica rapa FPsc
Brara.C00470 10.0kb upstream 10.0kb upstream 13859 true A03: 2222778-2236636 Brassica rapa FPsc
Brara.C00470 10.0kb upstream 10.0kb upstream 10000 false A03: 2222778-2232777 Brassica rapa FPsc
Brara.C00470 10.0kb downstream 10.0kb downstream 13859 true A03: 2232778-2246636 Brassica rapa FPsc
Brara.C00470 10.0kb downstream 10.0kb downstream 10000 false A03: 2236637-2246636 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380041 5261 Brassicaceae View MSA
123837048 5264 Brassicales-Malvales View MSA
124345373 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier