Gene : Brara.I03734 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  3734
Name:  ? Brara.I03734 Secondary Identifier:  ? PAC:30642319
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03734 0.5kb upstream 0.5kb upstream 3979 true A09: 34497672-34501650 Brassica rapa FPsc
Brara.I03734 0.5kb upstream 0.5kb upstream 500 false A09: 34501151-34501650 Brassica rapa FPsc
Brara.I03734 0.5kb downstream 0.5kb downstream 3979 true A09: 34497172-34501150 Brassica rapa FPsc
Brara.I03734 0.5kb downstream 0.5kb downstream 500 false A09: 34497172-34497671 Brassica rapa FPsc
Brara.I03734 1.0kb upstream 1.0kb upstream 4479 true A09: 34497672-34502150 Brassica rapa FPsc
Brara.I03734 1.0kb upstream 1.0kb upstream 1000 false A09: 34501151-34502150 Brassica rapa FPsc
Brara.I03734 1.0kb downstream 1.0kb downstream 4479 true A09: 34496672-34501150 Brassica rapa FPsc
Brara.I03734 1.0kb downstream 1.0kb downstream 1000 false A09: 34496672-34497671 Brassica rapa FPsc
Brara.I03734 2.0kb upstream 2.0kb upstream 5479 true A09: 34497672-34503150 Brassica rapa FPsc
Brara.I03734 2.0kb upstream 2.0kb upstream 2000 false A09: 34501151-34503150 Brassica rapa FPsc
Brara.I03734 2.0kb downstream 2.0kb downstream 5479 true A09: 34495672-34501150 Brassica rapa FPsc
Brara.I03734 2.0kb downstream 2.0kb downstream 2000 false A09: 34495672-34497671 Brassica rapa FPsc
Brara.I03734 5.0kb upstream 5.0kb upstream 8479 true A09: 34497672-34506150 Brassica rapa FPsc
Brara.I03734 5.0kb upstream 5.0kb upstream 5000 false A09: 34501151-34506150 Brassica rapa FPsc
Brara.I03734 5.0kb downstream 5.0kb downstream 8479 true A09: 34492672-34501150 Brassica rapa FPsc
Brara.I03734 5.0kb downstream 5.0kb downstream 5000 false A09: 34492672-34497671 Brassica rapa FPsc
Brara.I03734 10.0kb upstream 10.0kb upstream 13479 true A09: 34497672-34511150 Brassica rapa FPsc
Brara.I03734 10.0kb upstream 10.0kb upstream 10000 false A09: 34501151-34511150 Brassica rapa FPsc
Brara.I03734 10.0kb downstream 10.0kb downstream 13479 true A09: 34487672-34501150 Brassica rapa FPsc
Brara.I03734 10.0kb downstream 10.0kb downstream 10000 false A09: 34487672-34497671 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353656 5261 Brassicaceae Singleton cluster - no MSA
123842428 5264 Brassicales-Malvales View MSA
124323484 5266 SBM View MSA
124169491 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier