Gene : Brara.E01570 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR18896//PTHR18896:SF63 - PHOSPHOLIPASE D Genomic Order:  1570
Name:  ? Brara.E01570 Secondary Identifier:  ? PAC:30627314
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01570 0.5kb upstream 0.5kb upstream 3641 true A05: 10420962-10424602 Brassica rapa FPsc
Brara.E01570 0.5kb upstream 0.5kb upstream 500 false A05: 10420962-10421461 Brassica rapa FPsc
Brara.E01570 0.5kb downstream 0.5kb downstream 3641 true A05: 10421462-10425102 Brassica rapa FPsc
Brara.E01570 0.5kb downstream 0.5kb downstream 500 false A05: 10424603-10425102 Brassica rapa FPsc
Brara.E01570 1.0kb upstream 1.0kb upstream 4141 true A05: 10420462-10424602 Brassica rapa FPsc
Brara.E01570 1.0kb upstream 1.0kb upstream 1000 false A05: 10420462-10421461 Brassica rapa FPsc
Brara.E01570 1.0kb downstream 1.0kb downstream 4141 true A05: 10421462-10425602 Brassica rapa FPsc
Brara.E01570 1.0kb downstream 1.0kb downstream 1000 false A05: 10424603-10425602 Brassica rapa FPsc
Brara.E01570 2.0kb upstream 2.0kb upstream 5141 true A05: 10419462-10424602 Brassica rapa FPsc
Brara.E01570 2.0kb upstream 2.0kb upstream 2000 false A05: 10419462-10421461 Brassica rapa FPsc
Brara.E01570 2.0kb downstream 2.0kb downstream 5141 true A05: 10421462-10426602 Brassica rapa FPsc
Brara.E01570 2.0kb downstream 2.0kb downstream 2000 false A05: 10424603-10426602 Brassica rapa FPsc
Brara.E01570 5.0kb upstream 5.0kb upstream 8141 true A05: 10416462-10424602 Brassica rapa FPsc
Brara.E01570 5.0kb upstream 5.0kb upstream 5000 false A05: 10416462-10421461 Brassica rapa FPsc
Brara.E01570 5.0kb downstream 5.0kb downstream 8141 true A05: 10421462-10429602 Brassica rapa FPsc
Brara.E01570 5.0kb downstream 5.0kb downstream 5000 false A05: 10424603-10429602 Brassica rapa FPsc
Brara.E01570 10.0kb upstream 10.0kb upstream 13141 true A05: 10411462-10424602 Brassica rapa FPsc
Brara.E01570 10.0kb upstream 10.0kb upstream 10000 false A05: 10411462-10421461 Brassica rapa FPsc
Brara.E01570 10.0kb downstream 10.0kb downstream 13141 true A05: 10421462-10434602 Brassica rapa FPsc
Brara.E01570 10.0kb downstream 10.0kb downstream 10000 false A05: 10424603-10434602 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121507987 5273 Angiosperm View MSA
122356349 5261 Brassicaceae View MSA
123794476 5264 Brassicales-Malvales View MSA
124292282 5266 SBM View MSA
124145075 5268 Malvidae View MSA
123871522 5270 Rosid View MSA
123455745 5271 Pentapetalae View MSA
122491178 5272 Eudicot View MSA
120781127 5274 Embryophyte View MSA
122823187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier